Gene : Brara.A01511 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  1511
Name:  ? Brara.A01511 Secondary Identifier:  ? PAC:30638041
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6854 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01511 0.5kb upstream 0.5kb upstream 2812 true A01: 8393869-8396680 Brassica rapa FPsc
Brara.A01511 0.5kb upstream 0.5kb upstream 500 false A01: 8396181-8396680 Brassica rapa FPsc
Brara.A01511 0.5kb downstream 0.5kb downstream 2812 true A01: 8393369-8396180 Brassica rapa FPsc
Brara.A01511 0.5kb downstream 0.5kb downstream 500 false A01: 8393369-8393868 Brassica rapa FPsc
Brara.A01511 1.0kb upstream 1.0kb upstream 3312 true A01: 8393869-8397180 Brassica rapa FPsc
Brara.A01511 1.0kb upstream 1.0kb upstream 1000 false A01: 8396181-8397180 Brassica rapa FPsc
Brara.A01511 1.0kb downstream 1.0kb downstream 3312 true A01: 8392869-8396180 Brassica rapa FPsc
Brara.A01511 1.0kb downstream 1.0kb downstream 1000 false A01: 8392869-8393868 Brassica rapa FPsc
Brara.A01511 2.0kb upstream 2.0kb upstream 4312 true A01: 8393869-8398180 Brassica rapa FPsc
Brara.A01511 2.0kb upstream 2.0kb upstream 2000 false A01: 8396181-8398180 Brassica rapa FPsc
Brara.A01511 2.0kb downstream 2.0kb downstream 4312 true A01: 8391869-8396180 Brassica rapa FPsc
Brara.A01511 2.0kb downstream 2.0kb downstream 2000 false A01: 8391869-8393868 Brassica rapa FPsc
Brara.A01511 5.0kb upstream 5.0kb upstream 7312 true A01: 8393869-8401180 Brassica rapa FPsc
Brara.A01511 5.0kb upstream 5.0kb upstream 5000 false A01: 8396181-8401180 Brassica rapa FPsc
Brara.A01511 5.0kb downstream 5.0kb downstream 7312 true A01: 8388869-8396180 Brassica rapa FPsc
Brara.A01511 5.0kb downstream 5.0kb downstream 5000 false A01: 8388869-8393868 Brassica rapa FPsc
Brara.A01511 10.0kb upstream 10.0kb upstream 12312 true A01: 8393869-8406180 Brassica rapa FPsc
Brara.A01511 10.0kb upstream 10.0kb upstream 10000 false A01: 8396181-8406180 Brassica rapa FPsc
Brara.A01511 10.0kb downstream 10.0kb downstream 12312 true A01: 8383869-8396180 Brassica rapa FPsc
Brara.A01511 10.0kb downstream 10.0kb downstream 10000 false A01: 8383869-8393868 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370198 5261 Brassicaceae View MSA
123799915 5264 Brassicales-Malvales View MSA
124297385 5266 SBM View MSA
124149294 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier