Gene : Bostr.26833s0646 B. stricta v1.2

Defline:  (1 of 3) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  646
Name:  ? Bostr.26833s0646 Secondary Identifier:  ? PAC:30653244

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0646 0.5kb upstream 0.5kb upstream 4728 true Scaffold26833: 3458980-3463707 Boechera stricta
Bostr.26833s0646 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 3463208-3463707 Boechera stricta
Bostr.26833s0646 0.5kb downstream 0.5kb downstream 4728 true Scaffold26833: 3458480-3463207 Boechera stricta
Bostr.26833s0646 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 3458480-3458979 Boechera stricta
Bostr.26833s0646 1.0kb upstream 1.0kb upstream 5228 true Scaffold26833: 3458980-3464207 Boechera stricta
Bostr.26833s0646 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 3463208-3464207 Boechera stricta
Bostr.26833s0646 1.0kb downstream 1.0kb downstream 5228 true Scaffold26833: 3457980-3463207 Boechera stricta
Bostr.26833s0646 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 3457980-3458979 Boechera stricta
Bostr.26833s0646 2.0kb upstream 2.0kb upstream 6228 true Scaffold26833: 3458980-3465207 Boechera stricta
Bostr.26833s0646 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 3463208-3465207 Boechera stricta
Bostr.26833s0646 2.0kb downstream 2.0kb downstream 6228 true Scaffold26833: 3456980-3463207 Boechera stricta
Bostr.26833s0646 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 3456980-3458979 Boechera stricta
Bostr.26833s0646 5.0kb upstream 5.0kb upstream 9228 true Scaffold26833: 3458980-3468207 Boechera stricta
Bostr.26833s0646 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 3463208-3468207 Boechera stricta
Bostr.26833s0646 5.0kb downstream 5.0kb downstream 9228 true Scaffold26833: 3453980-3463207 Boechera stricta
Bostr.26833s0646 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 3453980-3458979 Boechera stricta
Bostr.26833s0646 10.0kb upstream 10.0kb upstream 14228 true Scaffold26833: 3458980-3473207 Boechera stricta
Bostr.26833s0646 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 3463208-3473207 Boechera stricta
Bostr.26833s0646 10.0kb downstream 10.0kb downstream 14228 true Scaffold26833: 3448980-3463207 Boechera stricta
Bostr.26833s0646 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 3448980-3458979 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367315 5261 Brassicaceae View MSA
123828437 5264 Brassicales-Malvales View MSA
124345106 5266 SBM View MSA
124251185 5268 Malvidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain