Gene : Bostr.26833s0643 B. stricta v1.2

Defline:  (1 of 2) PTHR26374:SF176 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN-RELATED Genomic Order:  643
Name:  ? Bostr.26833s0643 Secondary Identifier:  ? PAC:30653103

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0643 0.5kb upstream 0.5kb upstream 2478 true Scaffold26833: 3444538-3447015 Boechera stricta
Bostr.26833s0643 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 3446516-3447015 Boechera stricta
Bostr.26833s0643 0.5kb downstream 0.5kb downstream 2478 true Scaffold26833: 3444038-3446515 Boechera stricta
Bostr.26833s0643 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 3444038-3444537 Boechera stricta
Bostr.26833s0643 1.0kb upstream 1.0kb upstream 2978 true Scaffold26833: 3444538-3447515 Boechera stricta
Bostr.26833s0643 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 3446516-3447515 Boechera stricta
Bostr.26833s0643 1.0kb downstream 1.0kb downstream 2978 true Scaffold26833: 3443538-3446515 Boechera stricta
Bostr.26833s0643 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 3443538-3444537 Boechera stricta
Bostr.26833s0643 2.0kb upstream 2.0kb upstream 3978 true Scaffold26833: 3444538-3448515 Boechera stricta
Bostr.26833s0643 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 3446516-3448515 Boechera stricta
Bostr.26833s0643 2.0kb downstream 2.0kb downstream 3978 true Scaffold26833: 3442538-3446515 Boechera stricta
Bostr.26833s0643 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 3442538-3444537 Boechera stricta
Bostr.26833s0643 5.0kb upstream 5.0kb upstream 6978 true Scaffold26833: 3444538-3451515 Boechera stricta
Bostr.26833s0643 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 3446516-3451515 Boechera stricta
Bostr.26833s0643 5.0kb downstream 5.0kb downstream 6978 true Scaffold26833: 3439538-3446515 Boechera stricta
Bostr.26833s0643 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 3439538-3444537 Boechera stricta
Bostr.26833s0643 10.0kb upstream 10.0kb upstream 11978 true Scaffold26833: 3444538-3456515 Boechera stricta
Bostr.26833s0643 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 3446516-3456515 Boechera stricta
Bostr.26833s0643 10.0kb downstream 10.0kb downstream 11978 true Scaffold26833: 3434538-3446515 Boechera stricta
Bostr.26833s0643 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 3434538-3444537 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360980 5261 Brassicaceae View MSA
123839422 5264 Brassicales-Malvales View MSA
124342047 5266 SBM View MSA
124248505 5268 Malvidae View MSA
124070419 5270 Rosid View MSA
123743866 5271 Pentapetalae View MSA
122796757 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain