Gene : Bostr.26833s0585 B. stricta v1.2
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  585
Name:  ? Bostr.26833s0585 Secondary Identifier:  ? PAC:30652606
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYSTSYN-PWY Boechera stricta pathologic  
Bstricta PWY-6936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0585 0.5kb upstream 0.5kb upstream 2129 true Scaffold26833: 3145690-3147818 Boechera stricta
Bostr.26833s0585 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 3145690-3146189 Boechera stricta
Bostr.26833s0585 0.5kb downstream 0.5kb downstream 2129 true Scaffold26833: 3146190-3148318 Boechera stricta
Bostr.26833s0585 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 3147819-3148318 Boechera stricta
Bostr.26833s0585 1.0kb upstream 1.0kb upstream 2629 true Scaffold26833: 3145190-3147818 Boechera stricta
Bostr.26833s0585 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 3145190-3146189 Boechera stricta
Bostr.26833s0585 1.0kb downstream 1.0kb downstream 2629 true Scaffold26833: 3146190-3148818 Boechera stricta
Bostr.26833s0585 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 3147819-3148818 Boechera stricta
Bostr.26833s0585 2.0kb upstream 2.0kb upstream 3629 true Scaffold26833: 3144190-3147818 Boechera stricta
Bostr.26833s0585 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 3144190-3146189 Boechera stricta
Bostr.26833s0585 2.0kb downstream 2.0kb downstream 3629 true Scaffold26833: 3146190-3149818 Boechera stricta
Bostr.26833s0585 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 3147819-3149818 Boechera stricta
Bostr.26833s0585 5.0kb upstream 5.0kb upstream 6629 true Scaffold26833: 3141190-3147818 Boechera stricta
Bostr.26833s0585 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 3141190-3146189 Boechera stricta
Bostr.26833s0585 5.0kb downstream 5.0kb downstream 6629 true Scaffold26833: 3146190-3152818 Boechera stricta
Bostr.26833s0585 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 3147819-3152818 Boechera stricta
Bostr.26833s0585 10.0kb upstream 10.0kb upstream 11629 true Scaffold26833: 3136190-3147818 Boechera stricta
Bostr.26833s0585 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 3136190-3146189 Boechera stricta
Bostr.26833s0585 10.0kb downstream 10.0kb downstream 11629 true Scaffold26833: 3146190-3157818 Boechera stricta
Bostr.26833s0585 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 3147819-3157818 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368813 5261 Brassicaceae View MSA
123828462 5264 Brassicales-Malvales View MSA
124338589 5266 SBM View MSA
124250792 5268 Malvidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain