Gene : Bostr.26833s0589 B. stricta v1.2
Defline:  (1 of 1) PTHR23382:SF5 - MALATE DEHYDROGENASE Genomic Order:  589
Name:  ? Bostr.26833s0589 Secondary Identifier:  ? PAC:30653326
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY66-399 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0589 0.5kb upstream 0.5kb upstream 1778 true Scaffold26833: 3161713-3163490 Boechera stricta
Bostr.26833s0589 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 3162991-3163490 Boechera stricta
Bostr.26833s0589 0.5kb downstream 0.5kb downstream 1778 true Scaffold26833: 3161213-3162990 Boechera stricta
Bostr.26833s0589 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 3161213-3161712 Boechera stricta
Bostr.26833s0589 1.0kb upstream 1.0kb upstream 2278 true Scaffold26833: 3161713-3163990 Boechera stricta
Bostr.26833s0589 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 3162991-3163990 Boechera stricta
Bostr.26833s0589 1.0kb downstream 1.0kb downstream 2278 true Scaffold26833: 3160713-3162990 Boechera stricta
Bostr.26833s0589 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 3160713-3161712 Boechera stricta
Bostr.26833s0589 2.0kb upstream 2.0kb upstream 3278 true Scaffold26833: 3161713-3164990 Boechera stricta
Bostr.26833s0589 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 3162991-3164990 Boechera stricta
Bostr.26833s0589 2.0kb downstream 2.0kb downstream 3278 true Scaffold26833: 3159713-3162990 Boechera stricta
Bostr.26833s0589 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 3159713-3161712 Boechera stricta
Bostr.26833s0589 5.0kb upstream 5.0kb upstream 6278 true Scaffold26833: 3161713-3167990 Boechera stricta
Bostr.26833s0589 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 3162991-3167990 Boechera stricta
Bostr.26833s0589 5.0kb downstream 5.0kb downstream 6278 true Scaffold26833: 3156713-3162990 Boechera stricta
Bostr.26833s0589 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 3156713-3161712 Boechera stricta
Bostr.26833s0589 10.0kb upstream 10.0kb upstream 11278 true Scaffold26833: 3161713-3172990 Boechera stricta
Bostr.26833s0589 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 3162991-3172990 Boechera stricta
Bostr.26833s0589 10.0kb downstream 10.0kb downstream 11278 true Scaffold26833: 3151713-3162990 Boechera stricta
Bostr.26833s0589 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 3151713-3161712 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361174 5261 Brassicaceae View MSA
123830714 5264 Brassicales-Malvales View MSA
124349239 5266 SBM View MSA
124248989 5268 Malvidae View MSA
124071542 5270 Rosid View MSA
123746984 5271 Pentapetalae View MSA
122786587 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain