Gene : Bostr.26959s0200 B. stricta v1.2
Defline:  (1 of 1) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  200
Name:  ? Bostr.26959s0200 Secondary Identifier:  ? PAC:30671302
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6809 Boechera stricta pathologic  
Bstricta PWY-695 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0200 0.5kb upstream 0.5kb upstream 2142 true Scaffold26959: 1507991-1510132 Boechera stricta
Bostr.26959s0200 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 1507991-1508490 Boechera stricta
Bostr.26959s0200 0.5kb downstream 0.5kb downstream 2142 true Scaffold26959: 1508491-1510632 Boechera stricta
Bostr.26959s0200 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 1510133-1510632 Boechera stricta
Bostr.26959s0200 1.0kb upstream 1.0kb upstream 2642 true Scaffold26959: 1507491-1510132 Boechera stricta
Bostr.26959s0200 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 1507491-1508490 Boechera stricta
Bostr.26959s0200 1.0kb downstream 1.0kb downstream 2642 true Scaffold26959: 1508491-1511132 Boechera stricta
Bostr.26959s0200 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 1510133-1511132 Boechera stricta
Bostr.26959s0200 2.0kb upstream 2.0kb upstream 3642 true Scaffold26959: 1506491-1510132 Boechera stricta
Bostr.26959s0200 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 1506491-1508490 Boechera stricta
Bostr.26959s0200 2.0kb downstream 2.0kb downstream 3642 true Scaffold26959: 1508491-1512132 Boechera stricta
Bostr.26959s0200 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 1510133-1512132 Boechera stricta
Bostr.26959s0200 5.0kb upstream 5.0kb upstream 6642 true Scaffold26959: 1503491-1510132 Boechera stricta
Bostr.26959s0200 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 1503491-1508490 Boechera stricta
Bostr.26959s0200 5.0kb downstream 5.0kb downstream 6642 true Scaffold26959: 1508491-1515132 Boechera stricta
Bostr.26959s0200 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 1510133-1515132 Boechera stricta
Bostr.26959s0200 10.0kb upstream 10.0kb upstream 11642 true Scaffold26959: 1498491-1510132 Boechera stricta
Bostr.26959s0200 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 1498491-1508490 Boechera stricta
Bostr.26959s0200 10.0kb downstream 10.0kb downstream 11642 true Scaffold26959: 1508491-1520132 Boechera stricta
Bostr.26959s0200 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 1510133-1520132 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362178 5261 Brassicaceae View MSA
123832925 5264 Brassicales-Malvales View MSA
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain