Gene : Bostr.26959s0199 B. stricta v1.2
Defline:  (1 of 5) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  199
Name:  ? Bostr.26959s0199 Secondary Identifier:  ? PAC:30671275
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CALVIN-PWY Boechera stricta pathologic  
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-5723 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0199 0.5kb upstream 0.5kb upstream 1515 true Scaffold26959: 1505268-1506782 Boechera stricta
Bostr.26959s0199 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 1505268-1505767 Boechera stricta
Bostr.26959s0199 0.5kb downstream 0.5kb downstream 1515 true Scaffold26959: 1505768-1507282 Boechera stricta
Bostr.26959s0199 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 1506783-1507282 Boechera stricta
Bostr.26959s0199 1.0kb upstream 1.0kb upstream 2015 true Scaffold26959: 1504768-1506782 Boechera stricta
Bostr.26959s0199 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 1504768-1505767 Boechera stricta
Bostr.26959s0199 1.0kb downstream 1.0kb downstream 2015 true Scaffold26959: 1505768-1507782 Boechera stricta
Bostr.26959s0199 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 1506783-1507782 Boechera stricta
Bostr.26959s0199 2.0kb upstream 2.0kb upstream 3015 true Scaffold26959: 1503768-1506782 Boechera stricta
Bostr.26959s0199 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 1503768-1505767 Boechera stricta
Bostr.26959s0199 2.0kb downstream 2.0kb downstream 3015 true Scaffold26959: 1505768-1508782 Boechera stricta
Bostr.26959s0199 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 1506783-1508782 Boechera stricta
Bostr.26959s0199 5.0kb upstream 5.0kb upstream 6015 true Scaffold26959: 1500768-1506782 Boechera stricta
Bostr.26959s0199 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 1500768-1505767 Boechera stricta
Bostr.26959s0199 5.0kb downstream 5.0kb downstream 6015 true Scaffold26959: 1505768-1511782 Boechera stricta
Bostr.26959s0199 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 1506783-1511782 Boechera stricta
Bostr.26959s0199 10.0kb upstream 10.0kb upstream 11015 true Scaffold26959: 1495768-1506782 Boechera stricta
Bostr.26959s0199 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 1495768-1505767 Boechera stricta
Bostr.26959s0199 10.0kb downstream 10.0kb downstream 11015 true Scaffold26959: 1505768-1516782 Boechera stricta
Bostr.26959s0199 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 1506783-1516782 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain