Gene : Bostr.26959s0146 B. stricta v1.2

Defline:  (1 of 6) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED Genomic Order:  146
Name:  ? Bostr.26959s0146 Secondary Identifier:  ? PAC:30671391

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0146 0.5kb upstream 0.5kb upstream 2266 true Scaffold26959: 1027058-1029323 Boechera stricta
Bostr.26959s0146 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 1027058-1027557 Boechera stricta
Bostr.26959s0146 0.5kb downstream 0.5kb downstream 2266 true Scaffold26959: 1027558-1029823 Boechera stricta
Bostr.26959s0146 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 1029324-1029823 Boechera stricta
Bostr.26959s0146 1.0kb upstream 1.0kb upstream 2766 true Scaffold26959: 1026558-1029323 Boechera stricta
Bostr.26959s0146 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 1026558-1027557 Boechera stricta
Bostr.26959s0146 1.0kb downstream 1.0kb downstream 2766 true Scaffold26959: 1027558-1030323 Boechera stricta
Bostr.26959s0146 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 1029324-1030323 Boechera stricta
Bostr.26959s0146 2.0kb upstream 2.0kb upstream 3766 true Scaffold26959: 1025558-1029323 Boechera stricta
Bostr.26959s0146 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 1025558-1027557 Boechera stricta
Bostr.26959s0146 2.0kb downstream 2.0kb downstream 3766 true Scaffold26959: 1027558-1031323 Boechera stricta
Bostr.26959s0146 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 1029324-1031323 Boechera stricta
Bostr.26959s0146 5.0kb upstream 5.0kb upstream 6766 true Scaffold26959: 1022558-1029323 Boechera stricta
Bostr.26959s0146 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 1022558-1027557 Boechera stricta
Bostr.26959s0146 5.0kb downstream 5.0kb downstream 6766 true Scaffold26959: 1027558-1034323 Boechera stricta
Bostr.26959s0146 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 1029324-1034323 Boechera stricta
Bostr.26959s0146 10.0kb upstream 10.0kb upstream 11766 true Scaffold26959: 1017558-1029323 Boechera stricta
Bostr.26959s0146 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 1017558-1027557 Boechera stricta
Bostr.26959s0146 10.0kb downstream 10.0kb downstream 11766 true Scaffold26959: 1027558-1039323 Boechera stricta
Bostr.26959s0146 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 1029324-1039323 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341653 5261 Brassicaceae Singleton cluster - no MSA
123782031 5264 Brassicales-Malvales Singleton cluster - no MSA
124280308 5266 SBM Singleton cluster - no MSA
124135176 5268 Malvidae Singleton cluster - no MSA
124039147 5270 Rosid View MSA
123752521 5271 Pentapetalae View MSA
122774612 5272 Eudicot View MSA
122051150 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain