Gene : Bostr.26959s0153 B. stricta v1.2
Defline:  (1 of 1) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  153
Name:  ? Bostr.26959s0153 Secondary Identifier:  ? PAC:30670932
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5409 Boechera stricta pathologic  
Bstricta PWY-5410 Boechera stricta pathologic  
Bstricta PWY-735 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0153 0.5kb upstream 0.5kb upstream 4865 true Scaffold26959: 1070477-1075341 Boechera stricta
Bostr.26959s0153 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 1074842-1075341 Boechera stricta
Bostr.26959s0153 0.5kb downstream 0.5kb downstream 4865 true Scaffold26959: 1069977-1074841 Boechera stricta
Bostr.26959s0153 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 1069977-1070476 Boechera stricta
Bostr.26959s0153 1.0kb upstream 1.0kb upstream 5365 true Scaffold26959: 1070477-1075841 Boechera stricta
Bostr.26959s0153 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 1074842-1075841 Boechera stricta
Bostr.26959s0153 1.0kb downstream 1.0kb downstream 5365 true Scaffold26959: 1069477-1074841 Boechera stricta
Bostr.26959s0153 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 1069477-1070476 Boechera stricta
Bostr.26959s0153 2.0kb upstream 2.0kb upstream 6365 true Scaffold26959: 1070477-1076841 Boechera stricta
Bostr.26959s0153 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 1074842-1076841 Boechera stricta
Bostr.26959s0153 2.0kb downstream 2.0kb downstream 6365 true Scaffold26959: 1068477-1074841 Boechera stricta
Bostr.26959s0153 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 1068477-1070476 Boechera stricta
Bostr.26959s0153 5.0kb upstream 5.0kb upstream 9365 true Scaffold26959: 1070477-1079841 Boechera stricta
Bostr.26959s0153 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 1074842-1079841 Boechera stricta
Bostr.26959s0153 5.0kb downstream 5.0kb downstream 9365 true Scaffold26959: 1065477-1074841 Boechera stricta
Bostr.26959s0153 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 1065477-1070476 Boechera stricta
Bostr.26959s0153 10.0kb upstream 10.0kb upstream 14365 true Scaffold26959: 1070477-1084841 Boechera stricta
Bostr.26959s0153 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 1074842-1084841 Boechera stricta
Bostr.26959s0153 10.0kb downstream 10.0kb downstream 14365 true Scaffold26959: 1060477-1074841 Boechera stricta
Bostr.26959s0153 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 1060477-1070476 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365902 5261 Brassicaceae View MSA
123839661 5264 Brassicales-Malvales View MSA
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain