Gene : Bostr.26959s0437 B. stricta v1.2
Defline:  (1 of 1) PTHR24096:SF169 - 4-COUMARATE--COA LIGASE 3 Genomic Order:  437
Name:  ? Bostr.26959s0437 Secondary Identifier:  ? PAC:30671293
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1121 Boechera stricta pathologic  
Bstricta PWY1F-FLAVSYN Boechera stricta pathologic  
Bstricta PWY-361 Boechera stricta pathologic  
Bstricta PWY-6435 Boechera stricta pathologic  
Bstricta PWY-6673 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0437 0.5kb upstream 0.5kb upstream 5413 true Scaffold26959: 4484092-4489504 Boechera stricta
Bostr.26959s0437 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 4484092-4484591 Boechera stricta
Bostr.26959s0437 0.5kb downstream 0.5kb downstream 5413 true Scaffold26959: 4484592-4490004 Boechera stricta
Bostr.26959s0437 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 4489505-4490004 Boechera stricta
Bostr.26959s0437 1.0kb upstream 1.0kb upstream 5913 true Scaffold26959: 4483592-4489504 Boechera stricta
Bostr.26959s0437 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 4483592-4484591 Boechera stricta
Bostr.26959s0437 1.0kb downstream 1.0kb downstream 5913 true Scaffold26959: 4484592-4490504 Boechera stricta
Bostr.26959s0437 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 4489505-4490504 Boechera stricta
Bostr.26959s0437 2.0kb upstream 2.0kb upstream 6913 true Scaffold26959: 4482592-4489504 Boechera stricta
Bostr.26959s0437 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 4482592-4484591 Boechera stricta
Bostr.26959s0437 2.0kb downstream 2.0kb downstream 6913 true Scaffold26959: 4484592-4491504 Boechera stricta
Bostr.26959s0437 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 4489505-4491504 Boechera stricta
Bostr.26959s0437 5.0kb upstream 5.0kb upstream 9913 true Scaffold26959: 4479592-4489504 Boechera stricta
Bostr.26959s0437 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 4479592-4484591 Boechera stricta
Bostr.26959s0437 5.0kb downstream 5.0kb downstream 9913 true Scaffold26959: 4484592-4494504 Boechera stricta
Bostr.26959s0437 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 4489505-4494504 Boechera stricta
Bostr.26959s0437 10.0kb upstream 10.0kb upstream 14913 true Scaffold26959: 4474592-4489504 Boechera stricta
Bostr.26959s0437 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 4474592-4484591 Boechera stricta
Bostr.26959s0437 10.0kb downstream 10.0kb downstream 14913 true Scaffold26959: 4484592-4499504 Boechera stricta
Bostr.26959s0437 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 4489505-4499504 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374575 5261 Brassicaceae View MSA
123829315 5264 Brassicales-Malvales View MSA
124337093 5266 SBM View MSA
124239638 5268 Malvidae View MSA
124063529 5270 Rosid View MSA
123738118 5271 Pentapetalae View MSA
122792374 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain