Gene : Bostr.26959s0256 B. stricta v1.2

Defline:  (1 of 2) 2.1.1.114 - Polyprenyldihydroxybenzoate methyltransferase / Dihydroxyhexaprenylbenzoate methyltransferase Genomic Order:  256
Name:  ? Bostr.26959s0256 Secondary Identifier:  ? PAC:30671382

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5871 Boechera stricta pathologic  
Bstricta PWY-5872 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0256 0.5kb upstream 0.5kb upstream 3826 true Scaffold26959: 2248391-2252216 Boechera stricta
Bostr.26959s0256 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 2248391-2248890 Boechera stricta
Bostr.26959s0256 0.5kb downstream 0.5kb downstream 3826 true Scaffold26959: 2248891-2252716 Boechera stricta
Bostr.26959s0256 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 2252217-2252716 Boechera stricta
Bostr.26959s0256 1.0kb upstream 1.0kb upstream 4326 true Scaffold26959: 2247891-2252216 Boechera stricta
Bostr.26959s0256 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 2247891-2248890 Boechera stricta
Bostr.26959s0256 1.0kb downstream 1.0kb downstream 4326 true Scaffold26959: 2248891-2253216 Boechera stricta
Bostr.26959s0256 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 2252217-2253216 Boechera stricta
Bostr.26959s0256 2.0kb upstream 2.0kb upstream 5326 true Scaffold26959: 2246891-2252216 Boechera stricta
Bostr.26959s0256 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 2246891-2248890 Boechera stricta
Bostr.26959s0256 2.0kb downstream 2.0kb downstream 5326 true Scaffold26959: 2248891-2254216 Boechera stricta
Bostr.26959s0256 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 2252217-2254216 Boechera stricta
Bostr.26959s0256 5.0kb upstream 5.0kb upstream 8326 true Scaffold26959: 2243891-2252216 Boechera stricta
Bostr.26959s0256 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 2243891-2248890 Boechera stricta
Bostr.26959s0256 5.0kb downstream 5.0kb downstream 8326 true Scaffold26959: 2248891-2257216 Boechera stricta
Bostr.26959s0256 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 2252217-2257216 Boechera stricta
Bostr.26959s0256 10.0kb upstream 10.0kb upstream 13326 true Scaffold26959: 2238891-2252216 Boechera stricta
Bostr.26959s0256 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 2238891-2248890 Boechera stricta
Bostr.26959s0256 10.0kb downstream 10.0kb downstream 13326 true Scaffold26959: 2248891-2262216 Boechera stricta
Bostr.26959s0256 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 2252217-2262216 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363883 5261 Brassicaceae View MSA
123830048 5264 Brassicales-Malvales View MSA
124346626 5266 SBM View MSA
124241228 5268 Malvidae View MSA
124065361 5270 Rosid View MSA
123737741 5271 Pentapetalae View MSA
122789553 5272 Eudicot View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain