Gene : Bostr.27991s0088 B. stricta v1.2

Defline:  (1 of 3) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  88
Name:  ? Bostr.27991s0088 Secondary Identifier:  ? PAC:30677683

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27991s0088 0.5kb upstream 0.5kb upstream 6069 true Scaffold27991: 1005300-1011368 Boechera stricta
Bostr.27991s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold27991: 1005300-1005799 Boechera stricta
Bostr.27991s0088 0.5kb downstream 0.5kb downstream 6069 true Scaffold27991: 1005800-1011868 Boechera stricta
Bostr.27991s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold27991: 1011369-1011868 Boechera stricta
Bostr.27991s0088 1.0kb upstream 1.0kb upstream 6569 true Scaffold27991: 1004800-1011368 Boechera stricta
Bostr.27991s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold27991: 1004800-1005799 Boechera stricta
Bostr.27991s0088 1.0kb downstream 1.0kb downstream 6569 true Scaffold27991: 1005800-1012368 Boechera stricta
Bostr.27991s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold27991: 1011369-1012368 Boechera stricta
Bostr.27991s0088 2.0kb upstream 2.0kb upstream 7569 true Scaffold27991: 1003800-1011368 Boechera stricta
Bostr.27991s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold27991: 1003800-1005799 Boechera stricta
Bostr.27991s0088 2.0kb downstream 2.0kb downstream 7569 true Scaffold27991: 1005800-1013368 Boechera stricta
Bostr.27991s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold27991: 1011369-1013368 Boechera stricta
Bostr.27991s0088 5.0kb upstream 5.0kb upstream 10569 true Scaffold27991: 1000800-1011368 Boechera stricta
Bostr.27991s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold27991: 1000800-1005799 Boechera stricta
Bostr.27991s0088 5.0kb downstream 5.0kb downstream 10569 true Scaffold27991: 1005800-1016368 Boechera stricta
Bostr.27991s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold27991: 1011369-1016368 Boechera stricta
Bostr.27991s0088 10.0kb upstream 10.0kb upstream 15569 true Scaffold27991: 995800-1011368 Boechera stricta
Bostr.27991s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold27991: 995800-1005799 Boechera stricta
Bostr.27991s0088 10.0kb downstream 10.0kb downstream 15569 true Scaffold27991: 1005800-1021368 Boechera stricta
Bostr.27991s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold27991: 1011369-1021368 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368962 5261 Brassicaceae View MSA
123838110 5264 Brassicales-Malvales View MSA
124322399 5266 SBM View MSA
124169134 5268 Malvidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain