Gene : Bostr.27991s0106 B. stricta v1.2
Defline:  (1 of 3) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  106
Name:  ? Bostr.27991s0106 Secondary Identifier:  ? PAC:30677568
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYANCAT-PWY Boechera stricta pathologic  
Bstricta PWY-241 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  
Bstricta PWYQT-4429 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27991s0106 0.5kb upstream 0.5kb upstream 3813 true Scaffold27991: 1172809-1176621 Boechera stricta
Bostr.27991s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold27991: 1176122-1176621 Boechera stricta
Bostr.27991s0106 0.5kb downstream 0.5kb downstream 3813 true Scaffold27991: 1172309-1176121 Boechera stricta
Bostr.27991s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold27991: 1172309-1172808 Boechera stricta
Bostr.27991s0106 1.0kb upstream 1.0kb upstream 4313 true Scaffold27991: 1172809-1177121 Boechera stricta
Bostr.27991s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold27991: 1176122-1177121 Boechera stricta
Bostr.27991s0106 1.0kb downstream 1.0kb downstream 4313 true Scaffold27991: 1171809-1176121 Boechera stricta
Bostr.27991s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold27991: 1171809-1172808 Boechera stricta
Bostr.27991s0106 2.0kb upstream 2.0kb upstream 5313 true Scaffold27991: 1172809-1178121 Boechera stricta
Bostr.27991s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold27991: 1176122-1178121 Boechera stricta
Bostr.27991s0106 2.0kb downstream 2.0kb downstream 5313 true Scaffold27991: 1170809-1176121 Boechera stricta
Bostr.27991s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold27991: 1170809-1172808 Boechera stricta
Bostr.27991s0106 5.0kb upstream 5.0kb upstream 8313 true Scaffold27991: 1172809-1181121 Boechera stricta
Bostr.27991s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold27991: 1176122-1181121 Boechera stricta
Bostr.27991s0106 5.0kb downstream 5.0kb downstream 8313 true Scaffold27991: 1167809-1176121 Boechera stricta
Bostr.27991s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold27991: 1167809-1172808 Boechera stricta
Bostr.27991s0106 10.0kb upstream 10.0kb upstream 13313 true Scaffold27991: 1172809-1186121 Boechera stricta
Bostr.27991s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold27991: 1176122-1186121 Boechera stricta
Bostr.27991s0106 10.0kb downstream 10.0kb downstream 13313 true Scaffold27991: 1162809-1176121 Boechera stricta
Bostr.27991s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold27991: 1162809-1172808 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380316 5261 Brassicaceae View MSA
123838880 5264 Brassicales-Malvales View MSA
124350350 5266 SBM View MSA
124244340 5268 Malvidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain