Gene : Bostr.27991s0004 B. stricta v1.2
Defline:  (1 of 1) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  4
Name:  ? Bostr.27991s0004 Secondary Identifier:  ? PAC:30677583
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-43 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27991s0004 0.5kb upstream 0.5kb upstream 2746 true Scaffold27991: 63681-66426 Boechera stricta
Bostr.27991s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold27991: 65927-66426 Boechera stricta
Bostr.27991s0004 0.5kb downstream 0.5kb downstream 2746 true Scaffold27991: 63181-65926 Boechera stricta
Bostr.27991s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold27991: 63181-63680 Boechera stricta
Bostr.27991s0004 1.0kb upstream 1.0kb upstream 3246 true Scaffold27991: 63681-66926 Boechera stricta
Bostr.27991s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold27991: 65927-66926 Boechera stricta
Bostr.27991s0004 1.0kb downstream 1.0kb downstream 3246 true Scaffold27991: 62681-65926 Boechera stricta
Bostr.27991s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold27991: 62681-63680 Boechera stricta
Bostr.27991s0004 2.0kb upstream 2.0kb upstream 4246 true Scaffold27991: 63681-67926 Boechera stricta
Bostr.27991s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold27991: 65927-67926 Boechera stricta
Bostr.27991s0004 2.0kb downstream 2.0kb downstream 4246 true Scaffold27991: 61681-65926 Boechera stricta
Bostr.27991s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold27991: 61681-63680 Boechera stricta
Bostr.27991s0004 5.0kb upstream 5.0kb upstream 7246 true Scaffold27991: 63681-70926 Boechera stricta
Bostr.27991s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold27991: 65927-70926 Boechera stricta
Bostr.27991s0004 5.0kb downstream 5.0kb downstream 7246 true Scaffold27991: 58681-65926 Boechera stricta
Bostr.27991s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold27991: 58681-63680 Boechera stricta
Bostr.27991s0004 10.0kb upstream 10.0kb upstream 12246 true Scaffold27991: 63681-75926 Boechera stricta
Bostr.27991s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold27991: 65927-75926 Boechera stricta
Bostr.27991s0004 10.0kb downstream 10.0kb downstream 12246 true Scaffold27991: 53681-65926 Boechera stricta
Bostr.27991s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold27991: 53681-63680 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372754 5261 Brassicaceae View MSA
123838121 5264 Brassicales-Malvales View MSA
124345212 5266 SBM View MSA
124242710 5268 Malvidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain