Gene : Bostr.27895s0092 B. stricta v1.2

Defline:  (1 of 20) PF00069//PF00560//PF08263 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  92
Name:  ? Bostr.27895s0092 Secondary Identifier:  ? PAC:30650413

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27895s0092 0.5kb upstream 0.5kb upstream 3962 true Scaffold27895: 898983-902944 Boechera stricta
Bostr.27895s0092 0.5kb upstream 0.5kb upstream 500 false Scaffold27895: 898983-899482 Boechera stricta
Bostr.27895s0092 0.5kb downstream 0.5kb downstream 3962 true Scaffold27895: 899483-903444 Boechera stricta
Bostr.27895s0092 0.5kb downstream 0.5kb downstream 500 false Scaffold27895: 902945-903444 Boechera stricta
Bostr.27895s0092 1.0kb upstream 1.0kb upstream 4462 true Scaffold27895: 898483-902944 Boechera stricta
Bostr.27895s0092 1.0kb upstream 1.0kb upstream 1000 false Scaffold27895: 898483-899482 Boechera stricta
Bostr.27895s0092 1.0kb downstream 1.0kb downstream 4462 true Scaffold27895: 899483-903944 Boechera stricta
Bostr.27895s0092 1.0kb downstream 1.0kb downstream 1000 false Scaffold27895: 902945-903944 Boechera stricta
Bostr.27895s0092 2.0kb upstream 2.0kb upstream 5462 true Scaffold27895: 897483-902944 Boechera stricta
Bostr.27895s0092 2.0kb upstream 2.0kb upstream 2000 false Scaffold27895: 897483-899482 Boechera stricta
Bostr.27895s0092 2.0kb downstream 2.0kb downstream 5462 true Scaffold27895: 899483-904944 Boechera stricta
Bostr.27895s0092 2.0kb downstream 2.0kb downstream 2000 false Scaffold27895: 902945-904944 Boechera stricta
Bostr.27895s0092 5.0kb upstream 5.0kb upstream 8462 true Scaffold27895: 894483-902944 Boechera stricta
Bostr.27895s0092 5.0kb upstream 5.0kb upstream 5000 false Scaffold27895: 894483-899482 Boechera stricta
Bostr.27895s0092 5.0kb downstream 5.0kb downstream 8462 true Scaffold27895: 899483-907944 Boechera stricta
Bostr.27895s0092 5.0kb downstream 5.0kb downstream 5000 false Scaffold27895: 902945-907944 Boechera stricta
Bostr.27895s0092 10.0kb upstream 10.0kb upstream 13462 true Scaffold27895: 889483-902944 Boechera stricta
Bostr.27895s0092 10.0kb upstream 10.0kb upstream 10000 false Scaffold27895: 889483-899482 Boechera stricta
Bostr.27895s0092 10.0kb downstream 10.0kb downstream 13462 true Scaffold27895: 899483-912944 Boechera stricta
Bostr.27895s0092 10.0kb downstream 10.0kb downstream 10000 false Scaffold27895: 902945-912944 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360875 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain