Gene : Bostr.27895s0089 B. stricta v1.2
Defline:  (1 of 3) PTHR10217:SF500 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 5-RELATED Genomic Order:  89
Name:  ? Bostr.27895s0089 Secondary Identifier:  ? PAC:30650397
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27895s0089 0.5kb upstream 0.5kb upstream 3970 true Scaffold27895: 885631-889600 Boechera stricta
Bostr.27895s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold27895: 885631-886130 Boechera stricta
Bostr.27895s0089 0.5kb downstream 0.5kb downstream 3970 true Scaffold27895: 886131-890100 Boechera stricta
Bostr.27895s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold27895: 889601-890100 Boechera stricta
Bostr.27895s0089 1.0kb upstream 1.0kb upstream 4470 true Scaffold27895: 885131-889600 Boechera stricta
Bostr.27895s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold27895: 885131-886130 Boechera stricta
Bostr.27895s0089 1.0kb downstream 1.0kb downstream 4470 true Scaffold27895: 886131-890600 Boechera stricta
Bostr.27895s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold27895: 889601-890600 Boechera stricta
Bostr.27895s0089 2.0kb upstream 2.0kb upstream 5470 true Scaffold27895: 884131-889600 Boechera stricta
Bostr.27895s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold27895: 884131-886130 Boechera stricta
Bostr.27895s0089 2.0kb downstream 2.0kb downstream 5470 true Scaffold27895: 886131-891600 Boechera stricta
Bostr.27895s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold27895: 889601-891600 Boechera stricta
Bostr.27895s0089 5.0kb upstream 5.0kb upstream 8470 true Scaffold27895: 881131-889600 Boechera stricta
Bostr.27895s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold27895: 881131-886130 Boechera stricta
Bostr.27895s0089 5.0kb downstream 5.0kb downstream 8470 true Scaffold27895: 886131-894600 Boechera stricta
Bostr.27895s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold27895: 889601-894600 Boechera stricta
Bostr.27895s0089 10.0kb upstream 10.0kb upstream 13470 true Scaffold27895: 876131-889600 Boechera stricta
Bostr.27895s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold27895: 876131-886130 Boechera stricta
Bostr.27895s0089 10.0kb downstream 10.0kb downstream 13470 true Scaffold27895: 886131-899600 Boechera stricta
Bostr.27895s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold27895: 889601-899600 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365951 5261 Brassicaceae View MSA
123838006 5264 Brassicales-Malvales View MSA
124340121 5266 SBM View MSA
124238344 5268 Malvidae View MSA
124064062 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain