Gene : Bostr.27895s0106 B. stricta v1.2
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  106
Name:  ? Bostr.27895s0106 Secondary Identifier:  ? PAC:30650517
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5381 Boechera stricta pathologic  
Bstricta PWY-5695 Boechera stricta pathologic  
Bstricta PWY-6596 Boechera stricta pathologic  
Bstricta PWY-6606 Boechera stricta pathologic  
Bstricta PWY-6608 Boechera stricta pathologic  
Bstricta PWY-7185 Boechera stricta pathologic  
Bstricta SALVADEHYPOX-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27895s0106 0.5kb upstream 0.5kb upstream 4261 true Scaffold27895: 993312-997572 Boechera stricta
Bostr.27895s0106 0.5kb upstream 0.5kb upstream 500 false Scaffold27895: 997073-997572 Boechera stricta
Bostr.27895s0106 0.5kb downstream 0.5kb downstream 4261 true Scaffold27895: 992812-997072 Boechera stricta
Bostr.27895s0106 0.5kb downstream 0.5kb downstream 500 false Scaffold27895: 992812-993311 Boechera stricta
Bostr.27895s0106 1.0kb upstream 1.0kb upstream 4761 true Scaffold27895: 993312-998072 Boechera stricta
Bostr.27895s0106 1.0kb upstream 1.0kb upstream 1000 false Scaffold27895: 997073-998072 Boechera stricta
Bostr.27895s0106 1.0kb downstream 1.0kb downstream 4761 true Scaffold27895: 992312-997072 Boechera stricta
Bostr.27895s0106 1.0kb downstream 1.0kb downstream 1000 false Scaffold27895: 992312-993311 Boechera stricta
Bostr.27895s0106 2.0kb upstream 2.0kb upstream 5761 true Scaffold27895: 993312-999072 Boechera stricta
Bostr.27895s0106 2.0kb upstream 2.0kb upstream 2000 false Scaffold27895: 997073-999072 Boechera stricta
Bostr.27895s0106 2.0kb downstream 2.0kb downstream 5761 true Scaffold27895: 991312-997072 Boechera stricta
Bostr.27895s0106 2.0kb downstream 2.0kb downstream 2000 false Scaffold27895: 991312-993311 Boechera stricta
Bostr.27895s0106 5.0kb upstream 5.0kb upstream 8761 true Scaffold27895: 993312-1002072 Boechera stricta
Bostr.27895s0106 5.0kb upstream 5.0kb upstream 5000 false Scaffold27895: 997073-1002072 Boechera stricta
Bostr.27895s0106 5.0kb downstream 5.0kb downstream 8761 true Scaffold27895: 988312-997072 Boechera stricta
Bostr.27895s0106 5.0kb downstream 5.0kb downstream 5000 false Scaffold27895: 988312-993311 Boechera stricta
Bostr.27895s0106 10.0kb upstream 10.0kb upstream 13761 true Scaffold27895: 993312-1007072 Boechera stricta
Bostr.27895s0106 10.0kb upstream 10.0kb upstream 10000 false Scaffold27895: 997073-1007072 Boechera stricta
Bostr.27895s0106 10.0kb downstream 10.0kb downstream 13761 true Scaffold27895: 983312-997072 Boechera stricta
Bostr.27895s0106 10.0kb downstream 10.0kb downstream 10000 false Scaffold27895: 983312-993311 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369705 5261 Brassicaceae View MSA
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain