Gene : Bostr.28625s0033 B. stricta v1.2
Defline:  (1 of 1) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  33
Name:  ? Bostr.28625s0033 Secondary Identifier:  ? PAC:30679453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.28625s0033 0.5kb upstream 0.5kb upstream 5461 true Scaffold28625: 247609-253069 Boechera stricta
Bostr.28625s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold28625: 247609-248108 Boechera stricta
Bostr.28625s0033 0.5kb downstream 0.5kb downstream 5461 true Scaffold28625: 248109-253569 Boechera stricta
Bostr.28625s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold28625: 253070-253569 Boechera stricta
Bostr.28625s0033 1.0kb upstream 1.0kb upstream 5961 true Scaffold28625: 247109-253069 Boechera stricta
Bostr.28625s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold28625: 247109-248108 Boechera stricta
Bostr.28625s0033 1.0kb downstream 1.0kb downstream 5961 true Scaffold28625: 248109-254069 Boechera stricta
Bostr.28625s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold28625: 253070-254069 Boechera stricta
Bostr.28625s0033 2.0kb upstream 2.0kb upstream 6961 true Scaffold28625: 246109-253069 Boechera stricta
Bostr.28625s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold28625: 246109-248108 Boechera stricta
Bostr.28625s0033 2.0kb downstream 2.0kb downstream 6961 true Scaffold28625: 248109-255069 Boechera stricta
Bostr.28625s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold28625: 253070-255069 Boechera stricta
Bostr.28625s0033 5.0kb upstream 5.0kb upstream 9961 true Scaffold28625: 243109-253069 Boechera stricta
Bostr.28625s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold28625: 243109-248108 Boechera stricta
Bostr.28625s0033 5.0kb downstream 5.0kb downstream 9961 true Scaffold28625: 248109-258069 Boechera stricta
Bostr.28625s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold28625: 253070-258069 Boechera stricta
Bostr.28625s0033 10.0kb upstream 10.0kb upstream 14961 true Scaffold28625: 238109-253069 Boechera stricta
Bostr.28625s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold28625: 238109-248108 Boechera stricta
Bostr.28625s0033 10.0kb downstream 10.0kb downstream 14961 true Scaffold28625: 248109-263069 Boechera stricta
Bostr.28625s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold28625: 253070-263069 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
122365374 5261 Brassicaceae View MSA
123829108 5264 Brassicales-Malvales View MSA
124345515 5266 SBM View MSA
124243531 5268 Malvidae View MSA
124061636 5270 Rosid View MSA
123736898 5271 Pentapetalae View MSA
122790717 5272 Eudicot View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain