Gene : Bostr.28243s0028 B. stricta v1.2
Defline:  (1 of 4) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  28
Name:  ? Bostr.28243s0028 Secondary Identifier:  ? PAC:30669766
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.28243s0028 0.5kb upstream 0.5kb upstream 1755 true Scaffold28243: 205548-207302 Boechera stricta
Bostr.28243s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold28243: 205548-206047 Boechera stricta
Bostr.28243s0028 0.5kb downstream 0.5kb downstream 1755 true Scaffold28243: 206048-207802 Boechera stricta
Bostr.28243s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold28243: 207303-207802 Boechera stricta
Bostr.28243s0028 1.0kb upstream 1.0kb upstream 2255 true Scaffold28243: 205048-207302 Boechera stricta
Bostr.28243s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold28243: 205048-206047 Boechera stricta
Bostr.28243s0028 1.0kb downstream 1.0kb downstream 2255 true Scaffold28243: 206048-208302 Boechera stricta
Bostr.28243s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold28243: 207303-208302 Boechera stricta
Bostr.28243s0028 2.0kb upstream 2.0kb upstream 3255 true Scaffold28243: 204048-207302 Boechera stricta
Bostr.28243s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold28243: 204048-206047 Boechera stricta
Bostr.28243s0028 2.0kb downstream 2.0kb downstream 3255 true Scaffold28243: 206048-209302 Boechera stricta
Bostr.28243s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold28243: 207303-209302 Boechera stricta
Bostr.28243s0028 5.0kb upstream 5.0kb upstream 6255 true Scaffold28243: 201048-207302 Boechera stricta
Bostr.28243s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold28243: 201048-206047 Boechera stricta
Bostr.28243s0028 5.0kb downstream 5.0kb downstream 6255 true Scaffold28243: 206048-212302 Boechera stricta
Bostr.28243s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold28243: 207303-212302 Boechera stricta
Bostr.28243s0028 10.0kb upstream 10.0kb upstream 11255 true Scaffold28243: 196048-207302 Boechera stricta
Bostr.28243s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold28243: 196048-206047 Boechera stricta
Bostr.28243s0028 10.0kb downstream 10.0kb downstream 11255 true Scaffold28243: 206048-217302 Boechera stricta
Bostr.28243s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold28243: 207303-217302 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365146 5261 Brassicaceae View MSA
123839125 5264 Brassicales-Malvales View MSA
124339069 5266 SBM View MSA
124243658 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain