Gene : Bostr.28903s0001 B. stricta v1.2
Defline:  (1 of 1) PF00006//PF02874 - ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) // ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) Genomic Order:  1
Name:  ? Bostr.28903s0001 Secondary Identifier:  ? PAC:30679116
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6126 Boechera stricta pathologic  
Bstricta PWY-7219 Boechera stricta pathologic  
Bstricta PWY-7229 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.28903s0001 0.5kb upstream 0.5kb upstream 1803 true Scaffold28903: 1-1803 Boechera stricta
Bostr.28903s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold28903: 1-2 Boechera stricta
Bostr.28903s0001 0.5kb downstream 0.5kb downstream 1802 true Scaffold28903: 3-1804 Boechera stricta
Bostr.28903s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold28903: 1804-1804 Boechera stricta
Bostr.28903s0001 1.0kb upstream 1.0kb upstream 1803 true Scaffold28903: 1-1803 Boechera stricta
Bostr.28903s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold28903: 1-2 Boechera stricta
Bostr.28903s0001 1.0kb downstream 1.0kb downstream 1802 true Scaffold28903: 3-1804 Boechera stricta
Bostr.28903s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold28903: 1804-1804 Boechera stricta
Bostr.28903s0001 2.0kb upstream 2.0kb upstream 1803 true Scaffold28903: 1-1803 Boechera stricta
Bostr.28903s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold28903: 1-2 Boechera stricta
Bostr.28903s0001 2.0kb downstream 2.0kb downstream 1802 true Scaffold28903: 3-1804 Boechera stricta
Bostr.28903s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold28903: 1804-1804 Boechera stricta
Bostr.28903s0001 5.0kb upstream 5.0kb upstream 1803 true Scaffold28903: 1-1803 Boechera stricta
Bostr.28903s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold28903: 1-2 Boechera stricta
Bostr.28903s0001 5.0kb downstream 5.0kb downstream 1802 true Scaffold28903: 3-1804 Boechera stricta
Bostr.28903s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold28903: 1804-1804 Boechera stricta
Bostr.28903s0001 10.0kb upstream 10.0kb upstream 1803 true Scaffold28903: 1-1803 Boechera stricta
Bostr.28903s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold28903: 1-2 Boechera stricta
Bostr.28903s0001 10.0kb downstream 10.0kb downstream 1802 true Scaffold28903: 3-1804 Boechera stricta
Bostr.28903s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold28903: 1804-1804 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343762 5261 Brassicaceae View MSA
123783866 5264 Brassicales-Malvales View MSA
124350602 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain