Gene : Bostr.28625s0226 B. stricta v1.2

Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  226
Name:  ? Bostr.28625s0226 Secondary Identifier:  ? PAC:30679215

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.28625s0226 0.5kb upstream 0.5kb upstream 3988 true Scaffold28625: 1176818-1180805 Boechera stricta
Bostr.28625s0226 0.5kb upstream 0.5kb upstream 500 false Scaffold28625: 1176818-1177317 Boechera stricta
Bostr.28625s0226 0.5kb downstream 0.5kb downstream 3988 true Scaffold28625: 1177318-1181305 Boechera stricta
Bostr.28625s0226 0.5kb downstream 0.5kb downstream 500 false Scaffold28625: 1180806-1181305 Boechera stricta
Bostr.28625s0226 1.0kb upstream 1.0kb upstream 4488 true Scaffold28625: 1176318-1180805 Boechera stricta
Bostr.28625s0226 1.0kb upstream 1.0kb upstream 1000 false Scaffold28625: 1176318-1177317 Boechera stricta
Bostr.28625s0226 1.0kb downstream 1.0kb downstream 4488 true Scaffold28625: 1177318-1181805 Boechera stricta
Bostr.28625s0226 1.0kb downstream 1.0kb downstream 1000 false Scaffold28625: 1180806-1181805 Boechera stricta
Bostr.28625s0226 2.0kb upstream 2.0kb upstream 5488 true Scaffold28625: 1175318-1180805 Boechera stricta
Bostr.28625s0226 2.0kb upstream 2.0kb upstream 2000 false Scaffold28625: 1175318-1177317 Boechera stricta
Bostr.28625s0226 2.0kb downstream 2.0kb downstream 5488 true Scaffold28625: 1177318-1182805 Boechera stricta
Bostr.28625s0226 2.0kb downstream 2.0kb downstream 2000 false Scaffold28625: 1180806-1182805 Boechera stricta
Bostr.28625s0226 5.0kb upstream 5.0kb upstream 8488 true Scaffold28625: 1172318-1180805 Boechera stricta
Bostr.28625s0226 5.0kb upstream 5.0kb upstream 5000 false Scaffold28625: 1172318-1177317 Boechera stricta
Bostr.28625s0226 5.0kb downstream 5.0kb downstream 8488 true Scaffold28625: 1177318-1185805 Boechera stricta
Bostr.28625s0226 5.0kb downstream 5.0kb downstream 5000 false Scaffold28625: 1180806-1185805 Boechera stricta
Bostr.28625s0226 10.0kb upstream 10.0kb upstream 13488 true Scaffold28625: 1167318-1180805 Boechera stricta
Bostr.28625s0226 10.0kb upstream 10.0kb upstream 10000 false Scaffold28625: 1167318-1177317 Boechera stricta
Bostr.28625s0226 10.0kb downstream 10.0kb downstream 13488 true Scaffold28625: 1177318-1190805 Boechera stricta
Bostr.28625s0226 10.0kb downstream 10.0kb downstream 10000 false Scaffold28625: 1180806-1190805 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366524 5261 Brassicaceae View MSA
123799190 5264 Brassicales-Malvales View MSA
124296738 5266 SBM View MSA
124148806 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain