Gene : Bostr.2902s0217 B. stricta v1.2

Defline:  (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  217
Name:  ? Bostr.2902s0217 Secondary Identifier:  ? PAC:30655870

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARG-PRO-PWY Boechera stricta pathologic  
Bstricta PROSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3341 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2902s0217 0.5kb upstream 0.5kb upstream 2291 true Scaffold2902: 1026366-1028656 Boechera stricta
Bostr.2902s0217 0.5kb upstream 0.5kb upstream 500 false Scaffold2902: 1028157-1028656 Boechera stricta
Bostr.2902s0217 0.5kb downstream 0.5kb downstream 2291 true Scaffold2902: 1025866-1028156 Boechera stricta
Bostr.2902s0217 0.5kb downstream 0.5kb downstream 500 false Scaffold2902: 1025866-1026365 Boechera stricta
Bostr.2902s0217 1.0kb upstream 1.0kb upstream 2791 true Scaffold2902: 1026366-1029156 Boechera stricta
Bostr.2902s0217 1.0kb upstream 1.0kb upstream 1000 false Scaffold2902: 1028157-1029156 Boechera stricta
Bostr.2902s0217 1.0kb downstream 1.0kb downstream 2791 true Scaffold2902: 1025366-1028156 Boechera stricta
Bostr.2902s0217 1.0kb downstream 1.0kb downstream 1000 false Scaffold2902: 1025366-1026365 Boechera stricta
Bostr.2902s0217 2.0kb upstream 2.0kb upstream 3791 true Scaffold2902: 1026366-1030156 Boechera stricta
Bostr.2902s0217 2.0kb upstream 2.0kb upstream 2000 false Scaffold2902: 1028157-1030156 Boechera stricta
Bostr.2902s0217 2.0kb downstream 2.0kb downstream 3791 true Scaffold2902: 1024366-1028156 Boechera stricta
Bostr.2902s0217 2.0kb downstream 2.0kb downstream 2000 false Scaffold2902: 1024366-1026365 Boechera stricta
Bostr.2902s0217 5.0kb upstream 5.0kb upstream 6791 true Scaffold2902: 1026366-1033156 Boechera stricta
Bostr.2902s0217 5.0kb upstream 5.0kb upstream 5000 false Scaffold2902: 1028157-1033156 Boechera stricta
Bostr.2902s0217 5.0kb downstream 5.0kb downstream 6791 true Scaffold2902: 1021366-1028156 Boechera stricta
Bostr.2902s0217 5.0kb downstream 5.0kb downstream 5000 false Scaffold2902: 1021366-1026365 Boechera stricta
Bostr.2902s0217 10.0kb upstream 10.0kb upstream 11791 true Scaffold2902: 1026366-1038156 Boechera stricta
Bostr.2902s0217 10.0kb upstream 10.0kb upstream 10000 false Scaffold2902: 1028157-1038156 Boechera stricta
Bostr.2902s0217 10.0kb downstream 10.0kb downstream 11791 true Scaffold2902: 1016366-1028156 Boechera stricta
Bostr.2902s0217 10.0kb downstream 10.0kb downstream 10000 false Scaffold2902: 1016366-1026365 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361924 5261 Brassicaceae View MSA
123837658 5264 Brassicales-Malvales View MSA
124337864 5266 SBM View MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain