Gene : Bostr.2902s0158 B. stricta v1.2
Defline:  (1 of 1) PTHR10742:SF229 - PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  158
Name:  ? Bostr.2902s0158 Secondary Identifier:  ? PAC:30655869
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CHLOROPHYLL-SYN Boechera stricta pathologic  
Bstricta HEME-BIOSYNTHESIS-II Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2902s0158 0.5kb upstream 0.5kb upstream 5037 true Scaffold2902: 729278-734314 Boechera stricta
Bostr.2902s0158 0.5kb upstream 0.5kb upstream 500 false Scaffold2902: 733815-734314 Boechera stricta
Bostr.2902s0158 0.5kb downstream 0.5kb downstream 5037 true Scaffold2902: 728778-733814 Boechera stricta
Bostr.2902s0158 0.5kb downstream 0.5kb downstream 500 false Scaffold2902: 728778-729277 Boechera stricta
Bostr.2902s0158 1.0kb upstream 1.0kb upstream 5537 true Scaffold2902: 729278-734814 Boechera stricta
Bostr.2902s0158 1.0kb upstream 1.0kb upstream 1000 false Scaffold2902: 733815-734814 Boechera stricta
Bostr.2902s0158 1.0kb downstream 1.0kb downstream 5537 true Scaffold2902: 728278-733814 Boechera stricta
Bostr.2902s0158 1.0kb downstream 1.0kb downstream 1000 false Scaffold2902: 728278-729277 Boechera stricta
Bostr.2902s0158 2.0kb upstream 2.0kb upstream 6537 true Scaffold2902: 729278-735814 Boechera stricta
Bostr.2902s0158 2.0kb upstream 2.0kb upstream 2000 false Scaffold2902: 733815-735814 Boechera stricta
Bostr.2902s0158 2.0kb downstream 2.0kb downstream 6537 true Scaffold2902: 727278-733814 Boechera stricta
Bostr.2902s0158 2.0kb downstream 2.0kb downstream 2000 false Scaffold2902: 727278-729277 Boechera stricta
Bostr.2902s0158 5.0kb upstream 5.0kb upstream 9537 true Scaffold2902: 729278-738814 Boechera stricta
Bostr.2902s0158 5.0kb upstream 5.0kb upstream 5000 false Scaffold2902: 733815-738814 Boechera stricta
Bostr.2902s0158 5.0kb downstream 5.0kb downstream 9537 true Scaffold2902: 724278-733814 Boechera stricta
Bostr.2902s0158 5.0kb downstream 5.0kb downstream 5000 false Scaffold2902: 724278-729277 Boechera stricta
Bostr.2902s0158 10.0kb upstream 10.0kb upstream 14537 true Scaffold2902: 729278-743814 Boechera stricta
Bostr.2902s0158 10.0kb upstream 10.0kb upstream 10000 false Scaffold2902: 733815-743814 Boechera stricta
Bostr.2902s0158 10.0kb downstream 10.0kb downstream 14537 true Scaffold2902: 719278-733814 Boechera stricta
Bostr.2902s0158 10.0kb downstream 10.0kb downstream 10000 false Scaffold2902: 719278-729277 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377658 5261 Brassicaceae View MSA
123829368 5264 Brassicales-Malvales View MSA
124344124 5266 SBM View MSA
124241673 5268 Malvidae View MSA
124068806 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain