Gene : Bostr.2902s0128 B. stricta v1.2

Defline:  (1 of 1) 2.3.1.74 - Naringenin-chalcone synthase / Flavonone synthase Genomic Order:  128
Name:  ? Bostr.2902s0128 Secondary Identifier:  ? PAC:30656135

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY1F-FLAVSYN Boechera stricta pathologic  
Bstricta PWY-6787 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2902s0128 0.5kb upstream 0.5kb upstream 1930 true Scaffold2902: 601663-603592 Boechera stricta
Bostr.2902s0128 0.5kb upstream 0.5kb upstream 500 false Scaffold2902: 601663-602162 Boechera stricta
Bostr.2902s0128 0.5kb downstream 0.5kb downstream 1930 true Scaffold2902: 602163-604092 Boechera stricta
Bostr.2902s0128 0.5kb downstream 0.5kb downstream 500 false Scaffold2902: 603593-604092 Boechera stricta
Bostr.2902s0128 1.0kb upstream 1.0kb upstream 2430 true Scaffold2902: 601163-603592 Boechera stricta
Bostr.2902s0128 1.0kb upstream 1.0kb upstream 1000 false Scaffold2902: 601163-602162 Boechera stricta
Bostr.2902s0128 1.0kb downstream 1.0kb downstream 2430 true Scaffold2902: 602163-604592 Boechera stricta
Bostr.2902s0128 1.0kb downstream 1.0kb downstream 1000 false Scaffold2902: 603593-604592 Boechera stricta
Bostr.2902s0128 2.0kb upstream 2.0kb upstream 3430 true Scaffold2902: 600163-603592 Boechera stricta
Bostr.2902s0128 2.0kb upstream 2.0kb upstream 2000 false Scaffold2902: 600163-602162 Boechera stricta
Bostr.2902s0128 2.0kb downstream 2.0kb downstream 3430 true Scaffold2902: 602163-605592 Boechera stricta
Bostr.2902s0128 2.0kb downstream 2.0kb downstream 2000 false Scaffold2902: 603593-605592 Boechera stricta
Bostr.2902s0128 5.0kb upstream 5.0kb upstream 6430 true Scaffold2902: 597163-603592 Boechera stricta
Bostr.2902s0128 5.0kb upstream 5.0kb upstream 5000 false Scaffold2902: 597163-602162 Boechera stricta
Bostr.2902s0128 5.0kb downstream 5.0kb downstream 6430 true Scaffold2902: 602163-608592 Boechera stricta
Bostr.2902s0128 5.0kb downstream 5.0kb downstream 5000 false Scaffold2902: 603593-608592 Boechera stricta
Bostr.2902s0128 10.0kb upstream 10.0kb upstream 11430 true Scaffold2902: 592163-603592 Boechera stricta
Bostr.2902s0128 10.0kb upstream 10.0kb upstream 10000 false Scaffold2902: 592163-602162 Boechera stricta
Bostr.2902s0128 10.0kb downstream 10.0kb downstream 11430 true Scaffold2902: 602163-613592 Boechera stricta
Bostr.2902s0128 10.0kb downstream 10.0kb downstream 10000 false Scaffold2902: 603593-613592 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377529 5261 Brassicaceae View MSA
123840388 5264 Brassicales-Malvales View MSA
124351590 5266 SBM View MSA
124254080 5268 Malvidae View MSA
124069836 5270 Rosid View MSA
123744406 5271 Pentapetalae View MSA
122790395 5272 Eudicot View MSA
122051180 5273 Angiosperm View MSA
121350627 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain