Gene : Bostr.29044s0104 B. stricta v1.2
Defline:  (1 of 1) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  104
Name:  ? Bostr.29044s0104 Secondary Identifier:  ? PAC:30651809
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7213 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29044s0104 0.5kb upstream 0.5kb upstream 3654 true Scaffold29044: 1202576-1206229 Boechera stricta
Bostr.29044s0104 0.5kb upstream 0.5kb upstream 500 false Scaffold29044: 1202576-1203075 Boechera stricta
Bostr.29044s0104 0.5kb downstream 0.5kb downstream 3654 true Scaffold29044: 1203076-1206729 Boechera stricta
Bostr.29044s0104 0.5kb downstream 0.5kb downstream 500 false Scaffold29044: 1206230-1206729 Boechera stricta
Bostr.29044s0104 1.0kb upstream 1.0kb upstream 4154 true Scaffold29044: 1202076-1206229 Boechera stricta
Bostr.29044s0104 1.0kb upstream 1.0kb upstream 1000 false Scaffold29044: 1202076-1203075 Boechera stricta
Bostr.29044s0104 1.0kb downstream 1.0kb downstream 4154 true Scaffold29044: 1203076-1207229 Boechera stricta
Bostr.29044s0104 1.0kb downstream 1.0kb downstream 1000 false Scaffold29044: 1206230-1207229 Boechera stricta
Bostr.29044s0104 2.0kb upstream 2.0kb upstream 5154 true Scaffold29044: 1201076-1206229 Boechera stricta
Bostr.29044s0104 2.0kb upstream 2.0kb upstream 2000 false Scaffold29044: 1201076-1203075 Boechera stricta
Bostr.29044s0104 2.0kb downstream 2.0kb downstream 5154 true Scaffold29044: 1203076-1208229 Boechera stricta
Bostr.29044s0104 2.0kb downstream 2.0kb downstream 2000 false Scaffold29044: 1206230-1208229 Boechera stricta
Bostr.29044s0104 5.0kb upstream 5.0kb upstream 8154 true Scaffold29044: 1198076-1206229 Boechera stricta
Bostr.29044s0104 5.0kb upstream 5.0kb upstream 5000 false Scaffold29044: 1198076-1203075 Boechera stricta
Bostr.29044s0104 5.0kb downstream 5.0kb downstream 8154 true Scaffold29044: 1203076-1211229 Boechera stricta
Bostr.29044s0104 5.0kb downstream 5.0kb downstream 5000 false Scaffold29044: 1206230-1211229 Boechera stricta
Bostr.29044s0104 10.0kb upstream 10.0kb upstream 13154 true Scaffold29044: 1193076-1206229 Boechera stricta
Bostr.29044s0104 10.0kb upstream 10.0kb upstream 10000 false Scaffold29044: 1193076-1203075 Boechera stricta
Bostr.29044s0104 10.0kb downstream 10.0kb downstream 13154 true Scaffold29044: 1203076-1216229 Boechera stricta
Bostr.29044s0104 10.0kb downstream 10.0kb downstream 10000 false Scaffold29044: 1206230-1216229 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374580 5261 Brassicaceae View MSA
123834676 5264 Brassicales-Malvales View MSA
124339213 5266 SBM View MSA
124244974 5268 Malvidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain