Gene : Bostr.29044s0054 B. stricta v1.2
Defline:  (1 of 1) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  54
Name:  ? Bostr.29044s0054 Secondary Identifier:  ? PAC:30651837
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Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLNSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3282 Boechera stricta pathologic  
Bstricta PWY-381 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  
Bstricta PWY-6963 Boechera stricta pathologic  
Bstricta PWY-6964 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29044s0054 0.5kb upstream 0.5kb upstream 2922 true Scaffold29044: 550390-553311 Boechera stricta
Bostr.29044s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold29044: 552812-553311 Boechera stricta
Bostr.29044s0054 0.5kb downstream 0.5kb downstream 2922 true Scaffold29044: 549890-552811 Boechera stricta
Bostr.29044s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold29044: 549890-550389 Boechera stricta
Bostr.29044s0054 1.0kb upstream 1.0kb upstream 3422 true Scaffold29044: 550390-553811 Boechera stricta
Bostr.29044s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold29044: 552812-553811 Boechera stricta
Bostr.29044s0054 1.0kb downstream 1.0kb downstream 3422 true Scaffold29044: 549390-552811 Boechera stricta
Bostr.29044s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold29044: 549390-550389 Boechera stricta
Bostr.29044s0054 2.0kb upstream 2.0kb upstream 4422 true Scaffold29044: 550390-554811 Boechera stricta
Bostr.29044s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold29044: 552812-554811 Boechera stricta
Bostr.29044s0054 2.0kb downstream 2.0kb downstream 4422 true Scaffold29044: 548390-552811 Boechera stricta
Bostr.29044s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold29044: 548390-550389 Boechera stricta
Bostr.29044s0054 5.0kb upstream 5.0kb upstream 7422 true Scaffold29044: 550390-557811 Boechera stricta
Bostr.29044s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold29044: 552812-557811 Boechera stricta
Bostr.29044s0054 5.0kb downstream 5.0kb downstream 7422 true Scaffold29044: 545390-552811 Boechera stricta
Bostr.29044s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold29044: 545390-550389 Boechera stricta
Bostr.29044s0054 10.0kb upstream 10.0kb upstream 12422 true Scaffold29044: 550390-562811 Boechera stricta
Bostr.29044s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold29044: 552812-562811 Boechera stricta
Bostr.29044s0054 10.0kb downstream 10.0kb downstream 12422 true Scaffold29044: 540390-552811 Boechera stricta
Bostr.29044s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold29044: 540390-550389 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363026 5261 Brassicaceae View MSA
123834963 5264 Brassicales-Malvales View MSA
124336894 5266 SBM View MSA
124240193 5268 Malvidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain