Gene : Bostr.29044s0060 B. stricta v1.2
Defline:  (1 of 4) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  60
Name:  ? Bostr.29044s0060 Secondary Identifier:  ? PAC:30651807
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29044s0060 0.5kb upstream 0.5kb upstream 5843 true Scaffold29044: 723723-729565 Boechera stricta
Bostr.29044s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold29044: 723723-724222 Boechera stricta
Bostr.29044s0060 0.5kb downstream 0.5kb downstream 5843 true Scaffold29044: 724223-730065 Boechera stricta
Bostr.29044s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold29044: 729566-730065 Boechera stricta
Bostr.29044s0060 1.0kb upstream 1.0kb upstream 6343 true Scaffold29044: 723223-729565 Boechera stricta
Bostr.29044s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold29044: 723223-724222 Boechera stricta
Bostr.29044s0060 1.0kb downstream 1.0kb downstream 6343 true Scaffold29044: 724223-730565 Boechera stricta
Bostr.29044s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold29044: 729566-730565 Boechera stricta
Bostr.29044s0060 2.0kb upstream 2.0kb upstream 7343 true Scaffold29044: 722223-729565 Boechera stricta
Bostr.29044s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold29044: 722223-724222 Boechera stricta
Bostr.29044s0060 2.0kb downstream 2.0kb downstream 7343 true Scaffold29044: 724223-731565 Boechera stricta
Bostr.29044s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold29044: 729566-731565 Boechera stricta
Bostr.29044s0060 5.0kb upstream 5.0kb upstream 10343 true Scaffold29044: 719223-729565 Boechera stricta
Bostr.29044s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold29044: 719223-724222 Boechera stricta
Bostr.29044s0060 5.0kb downstream 5.0kb downstream 10343 true Scaffold29044: 724223-734565 Boechera stricta
Bostr.29044s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold29044: 729566-734565 Boechera stricta
Bostr.29044s0060 10.0kb upstream 10.0kb upstream 15343 true Scaffold29044: 714223-729565 Boechera stricta
Bostr.29044s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold29044: 714223-724222 Boechera stricta
Bostr.29044s0060 10.0kb downstream 10.0kb downstream 15343 true Scaffold29044: 724223-739565 Boechera stricta
Bostr.29044s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold29044: 729566-739565 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122339096 5261 Brassicaceae Singleton cluster - no MSA
123842916 5264 Brassicales-Malvales View MSA
124323862 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain