Gene : Bostr.29268s0001 B. stricta v1.2

Defline:  (1 of 1) PTHR24351:SF70 - PROTEIN KINASE PINOID 2 Genomic Order:  1
Name:  ? Bostr.29268s0001 Secondary Identifier:  ? PAC:30659466

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29268s0001 0.5kb upstream 0.5kb upstream 3382 true Scaffold29268: 6085-9466 Boechera stricta
Bostr.29268s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold29268: 8967-9466 Boechera stricta
Bostr.29268s0001 0.5kb downstream 0.5kb downstream 3382 true Scaffold29268: 5585-8966 Boechera stricta
Bostr.29268s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold29268: 5585-6084 Boechera stricta
Bostr.29268s0001 1.0kb upstream 1.0kb upstream 3882 true Scaffold29268: 6085-9966 Boechera stricta
Bostr.29268s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold29268: 8967-9966 Boechera stricta
Bostr.29268s0001 1.0kb downstream 1.0kb downstream 3882 true Scaffold29268: 5085-8966 Boechera stricta
Bostr.29268s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold29268: 5085-6084 Boechera stricta
Bostr.29268s0001 2.0kb upstream 2.0kb upstream 4882 true Scaffold29268: 6085-10966 Boechera stricta
Bostr.29268s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold29268: 8967-10966 Boechera stricta
Bostr.29268s0001 2.0kb downstream 2.0kb downstream 4882 true Scaffold29268: 4085-8966 Boechera stricta
Bostr.29268s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold29268: 4085-6084 Boechera stricta
Bostr.29268s0001 5.0kb upstream 5.0kb upstream 7882 true Scaffold29268: 6085-13966 Boechera stricta
Bostr.29268s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold29268: 8967-13966 Boechera stricta
Bostr.29268s0001 5.0kb downstream 5.0kb downstream 7882 true Scaffold29268: 1085-8966 Boechera stricta
Bostr.29268s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold29268: 1085-6084 Boechera stricta
Bostr.29268s0001 10.0kb upstream 10.0kb upstream 12882 true Scaffold29268: 6085-18966 Boechera stricta
Bostr.29268s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold29268: 8967-18966 Boechera stricta
Bostr.29268s0001 10.0kb downstream 10.0kb downstream 8966 true Scaffold29268: 1-8966 Boechera stricta
Bostr.29268s0001 10.0kb downstream 10.0kb downstream 6084 false Scaffold29268: 1-6084 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372202 5261 Brassicaceae View MSA
123833959 5264 Brassicales-Malvales View MSA
124340923 5266 SBM View MSA
124237879 5268 Malvidae View MSA
124061530 5270 Rosid View MSA
123741128 5271 Pentapetalae View MSA
122794491 5272 Eudicot View MSA
122048881 5273 Angiosperm View MSA
121311151 5274 Embryophyte View MSA
123348487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain