Gene : Bostr.29344s0016 B. stricta v1.2
Defline:  (1 of 2) PTHR11739:SF8 - CITRATE SYNTHASE, MITOCHONDRIAL Genomic Order:  16
Name:  ? Bostr.29344s0016 Secondary Identifier:  ? PAC:30678312
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYOXYLATE-BYPASS Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-561 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  
Bstricta PWY-6549 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29344s0016 0.5kb upstream 0.5kb upstream 4332 true Scaffold29344: 69563-73894 Boechera stricta
Bostr.29344s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold29344: 69563-70062 Boechera stricta
Bostr.29344s0016 0.5kb downstream 0.5kb downstream 4332 true Scaffold29344: 70063-74394 Boechera stricta
Bostr.29344s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold29344: 73895-74394 Boechera stricta
Bostr.29344s0016 1.0kb upstream 1.0kb upstream 4832 true Scaffold29344: 69063-73894 Boechera stricta
Bostr.29344s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold29344: 69063-70062 Boechera stricta
Bostr.29344s0016 1.0kb downstream 1.0kb downstream 4832 true Scaffold29344: 70063-74894 Boechera stricta
Bostr.29344s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold29344: 73895-74894 Boechera stricta
Bostr.29344s0016 2.0kb upstream 2.0kb upstream 5832 true Scaffold29344: 68063-73894 Boechera stricta
Bostr.29344s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold29344: 68063-70062 Boechera stricta
Bostr.29344s0016 2.0kb downstream 2.0kb downstream 5832 true Scaffold29344: 70063-75894 Boechera stricta
Bostr.29344s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold29344: 73895-75894 Boechera stricta
Bostr.29344s0016 5.0kb upstream 5.0kb upstream 8832 true Scaffold29344: 65063-73894 Boechera stricta
Bostr.29344s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold29344: 65063-70062 Boechera stricta
Bostr.29344s0016 5.0kb downstream 5.0kb downstream 8832 true Scaffold29344: 70063-78894 Boechera stricta
Bostr.29344s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold29344: 73895-78894 Boechera stricta
Bostr.29344s0016 10.0kb upstream 10.0kb upstream 13832 true Scaffold29344: 60063-73894 Boechera stricta
Bostr.29344s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold29344: 60063-70062 Boechera stricta
Bostr.29344s0016 10.0kb downstream 10.0kb downstream 13832 true Scaffold29344: 70063-83894 Boechera stricta
Bostr.29344s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold29344: 73895-83894 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
122368215 5261 Brassicaceae View MSA
123799513 5264 Brassicales-Malvales View MSA
124297025 5266 SBM View MSA
124250397 5268 Malvidae View MSA
124068700 5270 Rosid View MSA
123737684 5271 Pentapetalae View MSA
122792616 5272 Eudicot View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain