Gene : Bostr.29505s0011 B. stricta v1.2
Defline:  (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  11
Name:  ? Bostr.29505s0011 Secondary Identifier:  ? PAC:30675288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LEU-DEG2-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29505s0011 0.5kb upstream 0.5kb upstream 4588 true Scaffold29505: 138559-143146 Boechera stricta
Bostr.29505s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold29505: 142647-143146 Boechera stricta
Bostr.29505s0011 0.5kb downstream 0.5kb downstream 4588 true Scaffold29505: 138059-142646 Boechera stricta
Bostr.29505s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold29505: 138059-138558 Boechera stricta
Bostr.29505s0011 1.0kb upstream 1.0kb upstream 5088 true Scaffold29505: 138559-143646 Boechera stricta
Bostr.29505s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold29505: 142647-143646 Boechera stricta
Bostr.29505s0011 1.0kb downstream 1.0kb downstream 5088 true Scaffold29505: 137559-142646 Boechera stricta
Bostr.29505s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold29505: 137559-138558 Boechera stricta
Bostr.29505s0011 2.0kb upstream 2.0kb upstream 6088 true Scaffold29505: 138559-144646 Boechera stricta
Bostr.29505s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold29505: 142647-144646 Boechera stricta
Bostr.29505s0011 2.0kb downstream 2.0kb downstream 6088 true Scaffold29505: 136559-142646 Boechera stricta
Bostr.29505s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold29505: 136559-138558 Boechera stricta
Bostr.29505s0011 5.0kb upstream 5.0kb upstream 9088 true Scaffold29505: 138559-147646 Boechera stricta
Bostr.29505s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold29505: 142647-147646 Boechera stricta
Bostr.29505s0011 5.0kb downstream 5.0kb downstream 9088 true Scaffold29505: 133559-142646 Boechera stricta
Bostr.29505s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold29505: 133559-138558 Boechera stricta
Bostr.29505s0011 10.0kb upstream 10.0kb upstream 14088 true Scaffold29505: 138559-152646 Boechera stricta
Bostr.29505s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold29505: 142647-152646 Boechera stricta
Bostr.29505s0011 10.0kb downstream 10.0kb downstream 14088 true Scaffold29505: 128559-142646 Boechera stricta
Bostr.29505s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold29505: 128559-138558 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364667 5261 Brassicaceae View MSA
123834510 5264 Brassicales-Malvales View MSA
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain