Gene : Bostr.29223s0137 B. stricta v1.2
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  137
Name:  ? Bostr.29223s0137 Secondary Identifier:  ? PAC:30676939
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7560 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29223s0137 0.5kb upstream 0.5kb upstream 2203 true Scaffold29223: 1037813-1040015 Boechera stricta
Bostr.29223s0137 0.5kb upstream 0.5kb upstream 500 false Scaffold29223: 1037813-1038312 Boechera stricta
Bostr.29223s0137 0.5kb downstream 0.5kb downstream 2203 true Scaffold29223: 1038313-1040515 Boechera stricta
Bostr.29223s0137 0.5kb downstream 0.5kb downstream 500 false Scaffold29223: 1040016-1040515 Boechera stricta
Bostr.29223s0137 1.0kb upstream 1.0kb upstream 2703 true Scaffold29223: 1037313-1040015 Boechera stricta
Bostr.29223s0137 1.0kb upstream 1.0kb upstream 1000 false Scaffold29223: 1037313-1038312 Boechera stricta
Bostr.29223s0137 1.0kb downstream 1.0kb downstream 2703 true Scaffold29223: 1038313-1041015 Boechera stricta
Bostr.29223s0137 1.0kb downstream 1.0kb downstream 1000 false Scaffold29223: 1040016-1041015 Boechera stricta
Bostr.29223s0137 2.0kb upstream 2.0kb upstream 3703 true Scaffold29223: 1036313-1040015 Boechera stricta
Bostr.29223s0137 2.0kb upstream 2.0kb upstream 2000 false Scaffold29223: 1036313-1038312 Boechera stricta
Bostr.29223s0137 2.0kb downstream 2.0kb downstream 3703 true Scaffold29223: 1038313-1042015 Boechera stricta
Bostr.29223s0137 2.0kb downstream 2.0kb downstream 2000 false Scaffold29223: 1040016-1042015 Boechera stricta
Bostr.29223s0137 5.0kb upstream 5.0kb upstream 6703 true Scaffold29223: 1033313-1040015 Boechera stricta
Bostr.29223s0137 5.0kb upstream 5.0kb upstream 5000 false Scaffold29223: 1033313-1038312 Boechera stricta
Bostr.29223s0137 5.0kb downstream 5.0kb downstream 6703 true Scaffold29223: 1038313-1045015 Boechera stricta
Bostr.29223s0137 5.0kb downstream 5.0kb downstream 5000 false Scaffold29223: 1040016-1045015 Boechera stricta
Bostr.29223s0137 10.0kb upstream 10.0kb upstream 11703 true Scaffold29223: 1028313-1040015 Boechera stricta
Bostr.29223s0137 10.0kb upstream 10.0kb upstream 10000 false Scaffold29223: 1028313-1038312 Boechera stricta
Bostr.29223s0137 10.0kb downstream 10.0kb downstream 11703 true Scaffold29223: 1038313-1050015 Boechera stricta
Bostr.29223s0137 10.0kb downstream 10.0kb downstream 10000 false Scaffold29223: 1040016-1050015 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365152 5261 Brassicaceae View MSA
123835150 5264 Brassicales-Malvales View MSA
124346414 5266 SBM View MSA
124238483 5268 Malvidae View MSA
124062148 5270 Rosid View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain