Gene : Bostr.29827s0050 B. stricta v1.2
Defline:  (1 of 2) PTHR23024:SF227 - GIBBERELLIN RECEPTOR GID1A-RELATED Genomic Order:  50
Name:  ? Bostr.29827s0050 Secondary Identifier:  ? PAC:30679729
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6303 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29827s0050 0.5kb upstream 0.5kb upstream 2945 true Scaffold29827: 757635-760579 Boechera stricta
Bostr.29827s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold29827: 757635-758134 Boechera stricta
Bostr.29827s0050 0.5kb downstream 0.5kb downstream 2945 true Scaffold29827: 758135-761079 Boechera stricta
Bostr.29827s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold29827: 760580-761079 Boechera stricta
Bostr.29827s0050 1.0kb upstream 1.0kb upstream 3445 true Scaffold29827: 757135-760579 Boechera stricta
Bostr.29827s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold29827: 757135-758134 Boechera stricta
Bostr.29827s0050 1.0kb downstream 1.0kb downstream 3445 true Scaffold29827: 758135-761579 Boechera stricta
Bostr.29827s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold29827: 760580-761579 Boechera stricta
Bostr.29827s0050 2.0kb upstream 2.0kb upstream 4445 true Scaffold29827: 756135-760579 Boechera stricta
Bostr.29827s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold29827: 756135-758134 Boechera stricta
Bostr.29827s0050 2.0kb downstream 2.0kb downstream 4445 true Scaffold29827: 758135-762579 Boechera stricta
Bostr.29827s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold29827: 760580-762579 Boechera stricta
Bostr.29827s0050 5.0kb upstream 5.0kb upstream 7445 true Scaffold29827: 753135-760579 Boechera stricta
Bostr.29827s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold29827: 753135-758134 Boechera stricta
Bostr.29827s0050 5.0kb downstream 5.0kb downstream 7445 true Scaffold29827: 758135-765579 Boechera stricta
Bostr.29827s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold29827: 760580-765579 Boechera stricta
Bostr.29827s0050 10.0kb upstream 10.0kb upstream 12445 true Scaffold29827: 748135-760579 Boechera stricta
Bostr.29827s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold29827: 748135-758134 Boechera stricta
Bostr.29827s0050 10.0kb downstream 10.0kb downstream 12445 true Scaffold29827: 758135-770579 Boechera stricta
Bostr.29827s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold29827: 760580-770579 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362868 5261 Brassicaceae View MSA
123837846 5264 Brassicales-Malvales View MSA
124344141 5266 SBM View MSA
124250011 5268 Malvidae View MSA
124068362 5270 Rosid View MSA
123741426 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain