Gene : Bostr.29514s0033 B. stricta v1.2
Defline:  (1 of 9) PTHR11260:SF144 - F21J9.4 Genomic Order:  33
Name:  ? Bostr.29514s0033 Secondary Identifier:  ? PAC:30654954
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6842 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29514s0033 0.5kb upstream 0.5kb upstream 1584 true Scaffold29514: 263123-264706 Boechera stricta
Bostr.29514s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold29514: 264207-264706 Boechera stricta
Bostr.29514s0033 0.5kb downstream 0.5kb downstream 1584 true Scaffold29514: 262623-264206 Boechera stricta
Bostr.29514s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold29514: 262623-263122 Boechera stricta
Bostr.29514s0033 1.0kb upstream 1.0kb upstream 2084 true Scaffold29514: 263123-265206 Boechera stricta
Bostr.29514s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold29514: 264207-265206 Boechera stricta
Bostr.29514s0033 1.0kb downstream 1.0kb downstream 2084 true Scaffold29514: 262123-264206 Boechera stricta
Bostr.29514s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold29514: 262123-263122 Boechera stricta
Bostr.29514s0033 2.0kb upstream 2.0kb upstream 3084 true Scaffold29514: 263123-266206 Boechera stricta
Bostr.29514s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold29514: 264207-266206 Boechera stricta
Bostr.29514s0033 2.0kb downstream 2.0kb downstream 3084 true Scaffold29514: 261123-264206 Boechera stricta
Bostr.29514s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold29514: 261123-263122 Boechera stricta
Bostr.29514s0033 5.0kb upstream 5.0kb upstream 6084 true Scaffold29514: 263123-269206 Boechera stricta
Bostr.29514s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold29514: 264207-269206 Boechera stricta
Bostr.29514s0033 5.0kb downstream 5.0kb downstream 6084 true Scaffold29514: 258123-264206 Boechera stricta
Bostr.29514s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold29514: 258123-263122 Boechera stricta
Bostr.29514s0033 10.0kb upstream 10.0kb upstream 11084 true Scaffold29514: 263123-274206 Boechera stricta
Bostr.29514s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold29514: 264207-274206 Boechera stricta
Bostr.29514s0033 10.0kb downstream 10.0kb downstream 11084 true Scaffold29514: 253123-264206 Boechera stricta
Bostr.29514s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold29514: 253123-263122 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029867 5273 Angiosperm View MSA
122381318 5261 Brassicaceae View MSA
123803179 5264 Brassicales-Malvales View MSA
124349693 5266 SBM View MSA
124181028 5268 Malvidae View MSA
124039955 5270 Rosid View MSA
123752464 5271 Pentapetalae View MSA
122797800 5272 Eudicot View MSA
121351541 5274 Embryophyte View MSA
123382215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain