Gene : Bostr.29827s0252 B. stricta v1.2
Defline:  (1 of 1) PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Genomic Order:  252
Name:  ? Bostr.29827s0252 Secondary Identifier:  ? PAC:30679810
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29827s0252 0.5kb upstream 0.5kb upstream 4665 true Scaffold29827: 2643771-2648435 Boechera stricta
Bostr.29827s0252 0.5kb upstream 0.5kb upstream 500 false Scaffold29827: 2647936-2648435 Boechera stricta
Bostr.29827s0252 0.5kb downstream 0.5kb downstream 4665 true Scaffold29827: 2643271-2647935 Boechera stricta
Bostr.29827s0252 0.5kb downstream 0.5kb downstream 500 false Scaffold29827: 2643271-2643770 Boechera stricta
Bostr.29827s0252 1.0kb upstream 1.0kb upstream 5165 true Scaffold29827: 2643771-2648935 Boechera stricta
Bostr.29827s0252 1.0kb upstream 1.0kb upstream 1000 false Scaffold29827: 2647936-2648935 Boechera stricta
Bostr.29827s0252 1.0kb downstream 1.0kb downstream 5165 true Scaffold29827: 2642771-2647935 Boechera stricta
Bostr.29827s0252 1.0kb downstream 1.0kb downstream 1000 false Scaffold29827: 2642771-2643770 Boechera stricta
Bostr.29827s0252 2.0kb upstream 2.0kb upstream 6165 true Scaffold29827: 2643771-2649935 Boechera stricta
Bostr.29827s0252 2.0kb upstream 2.0kb upstream 2000 false Scaffold29827: 2647936-2649935 Boechera stricta
Bostr.29827s0252 2.0kb downstream 2.0kb downstream 6165 true Scaffold29827: 2641771-2647935 Boechera stricta
Bostr.29827s0252 2.0kb downstream 2.0kb downstream 2000 false Scaffold29827: 2641771-2643770 Boechera stricta
Bostr.29827s0252 5.0kb upstream 5.0kb upstream 9165 true Scaffold29827: 2643771-2652935 Boechera stricta
Bostr.29827s0252 5.0kb upstream 5.0kb upstream 5000 false Scaffold29827: 2647936-2652935 Boechera stricta
Bostr.29827s0252 5.0kb downstream 5.0kb downstream 9165 true Scaffold29827: 2638771-2647935 Boechera stricta
Bostr.29827s0252 5.0kb downstream 5.0kb downstream 5000 false Scaffold29827: 2638771-2643770 Boechera stricta
Bostr.29827s0252 10.0kb upstream 10.0kb upstream 14165 true Scaffold29827: 2643771-2657935 Boechera stricta
Bostr.29827s0252 10.0kb upstream 10.0kb upstream 10000 false Scaffold29827: 2647936-2657935 Boechera stricta
Bostr.29827s0252 10.0kb downstream 10.0kb downstream 14165 true Scaffold29827: 2633771-2647935 Boechera stricta
Bostr.29827s0252 10.0kb downstream 10.0kb downstream 10000 false Scaffold29827: 2633771-2643770 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370705 5261 Brassicaceae View MSA
123829618 5264 Brassicales-Malvales View MSA
124343160 5266 SBM View MSA
124241471 5268 Malvidae View MSA
124071418 5270 Rosid View MSA
123749462 5271 Pentapetalae View MSA
122791717 5272 Eudicot View MSA
122045456 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121347733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain