Gene : Bostr.29827s0285 B. stricta v1.2
Defline:  (1 of 1) PTHR11062//PTHR11062:SF43 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  285
Name:  ? Bostr.29827s0285 Secondary Identifier:  ? PAC:30679801
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5980 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29827s0285 0.5kb upstream 0.5kb upstream 2926 true Scaffold29827: 2855011-2857936 Boechera stricta
Bostr.29827s0285 0.5kb upstream 0.5kb upstream 500 false Scaffold29827: 2857437-2857936 Boechera stricta
Bostr.29827s0285 0.5kb downstream 0.5kb downstream 2926 true Scaffold29827: 2854511-2857436 Boechera stricta
Bostr.29827s0285 0.5kb downstream 0.5kb downstream 500 false Scaffold29827: 2854511-2855010 Boechera stricta
Bostr.29827s0285 1.0kb upstream 1.0kb upstream 3426 true Scaffold29827: 2855011-2858436 Boechera stricta
Bostr.29827s0285 1.0kb upstream 1.0kb upstream 1000 false Scaffold29827: 2857437-2858436 Boechera stricta
Bostr.29827s0285 1.0kb downstream 1.0kb downstream 3426 true Scaffold29827: 2854011-2857436 Boechera stricta
Bostr.29827s0285 1.0kb downstream 1.0kb downstream 1000 false Scaffold29827: 2854011-2855010 Boechera stricta
Bostr.29827s0285 2.0kb upstream 2.0kb upstream 4426 true Scaffold29827: 2855011-2859436 Boechera stricta
Bostr.29827s0285 2.0kb upstream 2.0kb upstream 2000 false Scaffold29827: 2857437-2859436 Boechera stricta
Bostr.29827s0285 2.0kb downstream 2.0kb downstream 4426 true Scaffold29827: 2853011-2857436 Boechera stricta
Bostr.29827s0285 2.0kb downstream 2.0kb downstream 2000 false Scaffold29827: 2853011-2855010 Boechera stricta
Bostr.29827s0285 5.0kb upstream 5.0kb upstream 7426 true Scaffold29827: 2855011-2862436 Boechera stricta
Bostr.29827s0285 5.0kb upstream 5.0kb upstream 5000 false Scaffold29827: 2857437-2862436 Boechera stricta
Bostr.29827s0285 5.0kb downstream 5.0kb downstream 7426 true Scaffold29827: 2850011-2857436 Boechera stricta
Bostr.29827s0285 5.0kb downstream 5.0kb downstream 5000 false Scaffold29827: 2850011-2855010 Boechera stricta
Bostr.29827s0285 10.0kb upstream 10.0kb upstream 12426 true Scaffold29827: 2855011-2867436 Boechera stricta
Bostr.29827s0285 10.0kb upstream 10.0kb upstream 10000 false Scaffold29827: 2857437-2867436 Boechera stricta
Bostr.29827s0285 10.0kb downstream 10.0kb downstream 12426 true Scaffold29827: 2845011-2857436 Boechera stricta
Bostr.29827s0285 10.0kb downstream 10.0kb downstream 10000 false Scaffold29827: 2845011-2855010 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368548 5261 Brassicaceae View MSA
123828903 5264 Brassicales-Malvales View MSA
124339349 5266 SBM View MSA
124238914 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain