Gene : Bostr.30057s0038 B. stricta v1.2
Defline:  (1 of 4) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  38
Name:  ? Bostr.30057s0038 Secondary Identifier:  ? PAC:30677858
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5871 Boechera stricta pathologic  
Bstricta PWY-5872 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30057s0038 0.5kb upstream 0.5kb upstream 8334 true Scaffold30057: 471100-479433 Boechera stricta
Bostr.30057s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold30057: 471100-471599 Boechera stricta
Bostr.30057s0038 0.5kb downstream 0.5kb downstream 8334 true Scaffold30057: 471600-479933 Boechera stricta
Bostr.30057s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold30057: 479434-479933 Boechera stricta
Bostr.30057s0038 1.0kb upstream 1.0kb upstream 8834 true Scaffold30057: 470600-479433 Boechera stricta
Bostr.30057s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold30057: 470600-471599 Boechera stricta
Bostr.30057s0038 1.0kb downstream 1.0kb downstream 8834 true Scaffold30057: 471600-480433 Boechera stricta
Bostr.30057s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold30057: 479434-480433 Boechera stricta
Bostr.30057s0038 2.0kb upstream 2.0kb upstream 9834 true Scaffold30057: 469600-479433 Boechera stricta
Bostr.30057s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold30057: 469600-471599 Boechera stricta
Bostr.30057s0038 2.0kb downstream 2.0kb downstream 9834 true Scaffold30057: 471600-481433 Boechera stricta
Bostr.30057s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold30057: 479434-481433 Boechera stricta
Bostr.30057s0038 5.0kb upstream 5.0kb upstream 12834 true Scaffold30057: 466600-479433 Boechera stricta
Bostr.30057s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold30057: 466600-471599 Boechera stricta
Bostr.30057s0038 5.0kb downstream 5.0kb downstream 12834 true Scaffold30057: 471600-484433 Boechera stricta
Bostr.30057s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold30057: 479434-484433 Boechera stricta
Bostr.30057s0038 10.0kb upstream 10.0kb upstream 17834 true Scaffold30057: 461600-479433 Boechera stricta
Bostr.30057s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold30057: 461600-471599 Boechera stricta
Bostr.30057s0038 10.0kb downstream 10.0kb downstream 17834 true Scaffold30057: 471600-489433 Boechera stricta
Bostr.30057s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold30057: 479434-489433 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122342978 5261 Brassicaceae View MSA
123783290 5264 Brassicales-Malvales View MSA
124281531 5266 SBM View MSA
124252362 5268 Malvidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain