Gene : Bostr.29964s0001 B. stricta v1.2

Defline:  (1 of 1) KOG3068 - mRNA splicing factor Genomic Order:  1
Name:  ? Bostr.29964s0001 Secondary Identifier:  ? PAC:30656152

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29964s0001 0.5kb upstream 0.5kb upstream 1403 true Scaffold29964: 19-1421 Boechera stricta
Bostr.29964s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold29964: 922-1421 Boechera stricta
Bostr.29964s0001 0.5kb downstream 0.5kb downstream 921 true Scaffold29964: 1-921 Boechera stricta
Bostr.29964s0001 0.5kb downstream 0.5kb downstream 18 false Scaffold29964: 1-18 Boechera stricta
Bostr.29964s0001 1.0kb upstream 1.0kb upstream 1903 true Scaffold29964: 19-1921 Boechera stricta
Bostr.29964s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold29964: 922-1921 Boechera stricta
Bostr.29964s0001 1.0kb downstream 1.0kb downstream 921 true Scaffold29964: 1-921 Boechera stricta
Bostr.29964s0001 1.0kb downstream 1.0kb downstream 18 false Scaffold29964: 1-18 Boechera stricta
Bostr.29964s0001 2.0kb upstream 2.0kb upstream 2903 true Scaffold29964: 19-2921 Boechera stricta
Bostr.29964s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold29964: 922-2921 Boechera stricta
Bostr.29964s0001 2.0kb downstream 2.0kb downstream 921 true Scaffold29964: 1-921 Boechera stricta
Bostr.29964s0001 2.0kb downstream 2.0kb downstream 18 false Scaffold29964: 1-18 Boechera stricta
Bostr.29964s0001 5.0kb upstream 5.0kb upstream 5903 true Scaffold29964: 19-5921 Boechera stricta
Bostr.29964s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold29964: 922-5921 Boechera stricta
Bostr.29964s0001 5.0kb downstream 5.0kb downstream 921 true Scaffold29964: 1-921 Boechera stricta
Bostr.29964s0001 5.0kb downstream 5.0kb downstream 18 false Scaffold29964: 1-18 Boechera stricta
Bostr.29964s0001 10.0kb upstream 10.0kb upstream 6549 true Scaffold29964: 19-6567 Boechera stricta
Bostr.29964s0001 10.0kb upstream 10.0kb upstream 5646 false Scaffold29964: 922-6567 Boechera stricta
Bostr.29964s0001 10.0kb downstream 10.0kb downstream 921 true Scaffold29964: 1-921 Boechera stricta
Bostr.29964s0001 10.0kb downstream 10.0kb downstream 18 false Scaffold29964: 1-18 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363425 5261 Brassicaceae View MSA
123830844 5264 Brassicales-Malvales View MSA
124344468 5266 SBM View MSA
124240907 5268 Malvidae View MSA
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain