Gene : Bostr.2983s0199 B. stricta v1.2
Defline:  (1 of 1) PTHR13861 - VACUOLAR ATP SYNTHASE SUBUNIT F Genomic Order:  199
Name:  ? Bostr.2983s0199 Secondary Identifier:  ? PAC:30662951
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6126 Boechera stricta pathologic  
Bstricta PWY-7219 Boechera stricta pathologic  
Bstricta PWY-7229 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2983s0199 0.5kb upstream 0.5kb upstream 2573 true Scaffold2983: 1273910-1276482 Boechera stricta
Bostr.2983s0199 0.5kb upstream 0.5kb upstream 500 false Scaffold2983: 1273910-1274409 Boechera stricta
Bostr.2983s0199 0.5kb downstream 0.5kb downstream 2573 true Scaffold2983: 1274410-1276982 Boechera stricta
Bostr.2983s0199 0.5kb downstream 0.5kb downstream 500 false Scaffold2983: 1276483-1276982 Boechera stricta
Bostr.2983s0199 1.0kb upstream 1.0kb upstream 3073 true Scaffold2983: 1273410-1276482 Boechera stricta
Bostr.2983s0199 1.0kb upstream 1.0kb upstream 1000 false Scaffold2983: 1273410-1274409 Boechera stricta
Bostr.2983s0199 1.0kb downstream 1.0kb downstream 3073 true Scaffold2983: 1274410-1277482 Boechera stricta
Bostr.2983s0199 1.0kb downstream 1.0kb downstream 1000 false Scaffold2983: 1276483-1277482 Boechera stricta
Bostr.2983s0199 2.0kb upstream 2.0kb upstream 4073 true Scaffold2983: 1272410-1276482 Boechera stricta
Bostr.2983s0199 2.0kb upstream 2.0kb upstream 2000 false Scaffold2983: 1272410-1274409 Boechera stricta
Bostr.2983s0199 2.0kb downstream 2.0kb downstream 4073 true Scaffold2983: 1274410-1278482 Boechera stricta
Bostr.2983s0199 2.0kb downstream 2.0kb downstream 2000 false Scaffold2983: 1276483-1278482 Boechera stricta
Bostr.2983s0199 5.0kb upstream 5.0kb upstream 7073 true Scaffold2983: 1269410-1276482 Boechera stricta
Bostr.2983s0199 5.0kb upstream 5.0kb upstream 5000 false Scaffold2983: 1269410-1274409 Boechera stricta
Bostr.2983s0199 5.0kb downstream 5.0kb downstream 7073 true Scaffold2983: 1274410-1281482 Boechera stricta
Bostr.2983s0199 5.0kb downstream 5.0kb downstream 5000 false Scaffold2983: 1276483-1281482 Boechera stricta
Bostr.2983s0199 10.0kb upstream 10.0kb upstream 12073 true Scaffold2983: 1264410-1276482 Boechera stricta
Bostr.2983s0199 10.0kb upstream 10.0kb upstream 10000 false Scaffold2983: 1264410-1274409 Boechera stricta
Bostr.2983s0199 10.0kb downstream 10.0kb downstream 12073 true Scaffold2983: 1274410-1286482 Boechera stricta
Bostr.2983s0199 10.0kb downstream 10.0kb downstream 10000 false Scaffold2983: 1276483-1286482 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376110 5261 Brassicaceae View MSA
123837882 5264 Brassicales-Malvales View MSA
124345507 5266 SBM View MSA
124243289 5268 Malvidae View MSA
124062785 5270 Rosid View MSA
123736748 5271 Pentapetalae View MSA
122792211 5272 Eudicot View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain