Gene : Bostr.30275s0247 B. stricta v1.2
Defline:  (1 of 2) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  247
Name:  ? Bostr.30275s0247 Secondary Identifier:  ? PAC:30665367
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSYN-PWY Boechera stricta pathologic  
Bstricta GLUTORN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0247 0.5kb upstream 0.5kb upstream 3201 true Scaffold30275: 1525286-1528486 Boechera stricta
Bostr.30275s0247 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 1525286-1525785 Boechera stricta
Bostr.30275s0247 0.5kb downstream 0.5kb downstream 3201 true Scaffold30275: 1525786-1528986 Boechera stricta
Bostr.30275s0247 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 1528487-1528986 Boechera stricta
Bostr.30275s0247 1.0kb upstream 1.0kb upstream 3701 true Scaffold30275: 1524786-1528486 Boechera stricta
Bostr.30275s0247 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 1524786-1525785 Boechera stricta
Bostr.30275s0247 1.0kb downstream 1.0kb downstream 3701 true Scaffold30275: 1525786-1529486 Boechera stricta
Bostr.30275s0247 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 1528487-1529486 Boechera stricta
Bostr.30275s0247 2.0kb upstream 2.0kb upstream 4701 true Scaffold30275: 1523786-1528486 Boechera stricta
Bostr.30275s0247 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 1523786-1525785 Boechera stricta
Bostr.30275s0247 2.0kb downstream 2.0kb downstream 4701 true Scaffold30275: 1525786-1530486 Boechera stricta
Bostr.30275s0247 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 1528487-1530486 Boechera stricta
Bostr.30275s0247 5.0kb upstream 5.0kb upstream 7701 true Scaffold30275: 1520786-1528486 Boechera stricta
Bostr.30275s0247 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 1520786-1525785 Boechera stricta
Bostr.30275s0247 5.0kb downstream 5.0kb downstream 7701 true Scaffold30275: 1525786-1533486 Boechera stricta
Bostr.30275s0247 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 1528487-1533486 Boechera stricta
Bostr.30275s0247 10.0kb upstream 10.0kb upstream 12701 true Scaffold30275: 1515786-1528486 Boechera stricta
Bostr.30275s0247 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 1515786-1525785 Boechera stricta
Bostr.30275s0247 10.0kb downstream 10.0kb downstream 12701 true Scaffold30275: 1525786-1538486 Boechera stricta
Bostr.30275s0247 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 1528487-1538486 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375657 5261 Brassicaceae View MSA
123831336 5264 Brassicales-Malvales View MSA
124343627 5266 SBM View MSA
124240366 5268 Malvidae View MSA
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain