Gene : Bostr.30275s0182 B. stricta v1.2
Defline:  (1 of 1) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  182
Name:  ? Bostr.30275s0182 Secondary Identifier:  ? PAC:30664916
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ANAEROFRUCAT-PWY Boechera stricta pathologic  
Bstricta PWY-5481 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0182 0.5kb upstream 0.5kb upstream 2108 true Scaffold30275: 1137966-1140073 Boechera stricta
Bostr.30275s0182 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 1137966-1138465 Boechera stricta
Bostr.30275s0182 0.5kb downstream 0.5kb downstream 2108 true Scaffold30275: 1138466-1140573 Boechera stricta
Bostr.30275s0182 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 1140074-1140573 Boechera stricta
Bostr.30275s0182 1.0kb upstream 1.0kb upstream 2608 true Scaffold30275: 1137466-1140073 Boechera stricta
Bostr.30275s0182 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 1137466-1138465 Boechera stricta
Bostr.30275s0182 1.0kb downstream 1.0kb downstream 2608 true Scaffold30275: 1138466-1141073 Boechera stricta
Bostr.30275s0182 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 1140074-1141073 Boechera stricta
Bostr.30275s0182 2.0kb upstream 2.0kb upstream 3608 true Scaffold30275: 1136466-1140073 Boechera stricta
Bostr.30275s0182 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 1136466-1138465 Boechera stricta
Bostr.30275s0182 2.0kb downstream 2.0kb downstream 3608 true Scaffold30275: 1138466-1142073 Boechera stricta
Bostr.30275s0182 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 1140074-1142073 Boechera stricta
Bostr.30275s0182 5.0kb upstream 5.0kb upstream 6608 true Scaffold30275: 1133466-1140073 Boechera stricta
Bostr.30275s0182 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 1133466-1138465 Boechera stricta
Bostr.30275s0182 5.0kb downstream 5.0kb downstream 6608 true Scaffold30275: 1138466-1145073 Boechera stricta
Bostr.30275s0182 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 1140074-1145073 Boechera stricta
Bostr.30275s0182 10.0kb upstream 10.0kb upstream 11608 true Scaffold30275: 1128466-1140073 Boechera stricta
Bostr.30275s0182 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 1128466-1138465 Boechera stricta
Bostr.30275s0182 10.0kb downstream 10.0kb downstream 11608 true Scaffold30275: 1138466-1150073 Boechera stricta
Bostr.30275s0182 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 1140074-1150073 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380281 5261 Brassicaceae View MSA
123834652 5264 Brassicales-Malvales View MSA
124340660 5266 SBM View MSA
124253081 5268 Malvidae View MSA
124064441 5270 Rosid View MSA
123739146 5271 Pentapetalae View MSA
122785845 5272 Eudicot View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain