Gene : Bostr.30275s0081 B. stricta v1.2
Defline:  (1 of 1) PTHR10209:SF226 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  81
Name:  ? Bostr.30275s0081 Secondary Identifier:  ? PAC:30665005
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5125 Boechera stricta pathologic  
Bstricta PWY-641 Boechera stricta pathologic  
Bstricta PWY-7267 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0081 0.5kb upstream 0.5kb upstream 1949 true Scaffold30275: 572843-574791 Boechera stricta
Bostr.30275s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 574292-574791 Boechera stricta
Bostr.30275s0081 0.5kb downstream 0.5kb downstream 1949 true Scaffold30275: 572343-574291 Boechera stricta
Bostr.30275s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 572343-572842 Boechera stricta
Bostr.30275s0081 1.0kb upstream 1.0kb upstream 2449 true Scaffold30275: 572843-575291 Boechera stricta
Bostr.30275s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 574292-575291 Boechera stricta
Bostr.30275s0081 1.0kb downstream 1.0kb downstream 2449 true Scaffold30275: 571843-574291 Boechera stricta
Bostr.30275s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 571843-572842 Boechera stricta
Bostr.30275s0081 2.0kb upstream 2.0kb upstream 3449 true Scaffold30275: 572843-576291 Boechera stricta
Bostr.30275s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 574292-576291 Boechera stricta
Bostr.30275s0081 2.0kb downstream 2.0kb downstream 3449 true Scaffold30275: 570843-574291 Boechera stricta
Bostr.30275s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 570843-572842 Boechera stricta
Bostr.30275s0081 5.0kb upstream 5.0kb upstream 6449 true Scaffold30275: 572843-579291 Boechera stricta
Bostr.30275s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 574292-579291 Boechera stricta
Bostr.30275s0081 5.0kb downstream 5.0kb downstream 6449 true Scaffold30275: 567843-574291 Boechera stricta
Bostr.30275s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 567843-572842 Boechera stricta
Bostr.30275s0081 10.0kb upstream 10.0kb upstream 11449 true Scaffold30275: 572843-584291 Boechera stricta
Bostr.30275s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 574292-584291 Boechera stricta
Bostr.30275s0081 10.0kb downstream 10.0kb downstream 11449 true Scaffold30275: 562843-574291 Boechera stricta
Bostr.30275s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 562843-572842 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026742 5273 Angiosperm View MSA
122370796 5261 Brassicaceae View MSA
123828871 5264 Brassicales-Malvales View MSA
124341199 5266 SBM View MSA
124237151 5268 Malvidae View MSA
124062764 5270 Rosid View MSA
123736643 5271 Pentapetalae View MSA
122786747 5272 Eudicot View MSA
121347125 5274 Embryophyte View MSA
123380497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain