Gene : Bostr.30275s0088 B. stricta v1.2
Defline:  (1 of 33) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  88
Name:  ? Bostr.30275s0088 Secondary Identifier:  ? PAC:30665079
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0088 0.5kb upstream 0.5kb upstream 2786 true Scaffold30275: 626122-628907 Boechera stricta
Bostr.30275s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 626122-626621 Boechera stricta
Bostr.30275s0088 0.5kb downstream 0.5kb downstream 2786 true Scaffold30275: 626622-629407 Boechera stricta
Bostr.30275s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 628908-629407 Boechera stricta
Bostr.30275s0088 1.0kb upstream 1.0kb upstream 3286 true Scaffold30275: 625622-628907 Boechera stricta
Bostr.30275s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 625622-626621 Boechera stricta
Bostr.30275s0088 1.0kb downstream 1.0kb downstream 3286 true Scaffold30275: 626622-629907 Boechera stricta
Bostr.30275s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 628908-629907 Boechera stricta
Bostr.30275s0088 2.0kb upstream 2.0kb upstream 4286 true Scaffold30275: 624622-628907 Boechera stricta
Bostr.30275s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 624622-626621 Boechera stricta
Bostr.30275s0088 2.0kb downstream 2.0kb downstream 4286 true Scaffold30275: 626622-630907 Boechera stricta
Bostr.30275s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 628908-630907 Boechera stricta
Bostr.30275s0088 5.0kb upstream 5.0kb upstream 7286 true Scaffold30275: 621622-628907 Boechera stricta
Bostr.30275s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 621622-626621 Boechera stricta
Bostr.30275s0088 5.0kb downstream 5.0kb downstream 7286 true Scaffold30275: 626622-633907 Boechera stricta
Bostr.30275s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 628908-633907 Boechera stricta
Bostr.30275s0088 10.0kb upstream 10.0kb upstream 12286 true Scaffold30275: 616622-628907 Boechera stricta
Bostr.30275s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 616622-626621 Boechera stricta
Bostr.30275s0088 10.0kb downstream 10.0kb downstream 12286 true Scaffold30275: 626622-638907 Boechera stricta
Bostr.30275s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 628908-638907 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372528 5261 Brassicaceae View MSA
123839281 5264 Brassicales-Malvales View MSA
124340689 5266 SBM View MSA
124240130 5268 Malvidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain