Gene : Bostr.3148s0052 B. stricta v1.2
Defline:  (1 of 2) PTHR33447:SF2 - PROTEIN PCS-1, ISOFORM A Genomic Order:  52
Name:  ? Bostr.3148s0052 Secondary Identifier:  ? PAC:30655534
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6745 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3148s0052 0.5kb upstream 0.5kb upstream 4016 true Scaffold3148: 389821-393836 Boechera stricta
Bostr.3148s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold3148: 393337-393836 Boechera stricta
Bostr.3148s0052 0.5kb downstream 0.5kb downstream 4016 true Scaffold3148: 389321-393336 Boechera stricta
Bostr.3148s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold3148: 389321-389820 Boechera stricta
Bostr.3148s0052 1.0kb upstream 1.0kb upstream 4516 true Scaffold3148: 389821-394336 Boechera stricta
Bostr.3148s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold3148: 393337-394336 Boechera stricta
Bostr.3148s0052 1.0kb downstream 1.0kb downstream 4516 true Scaffold3148: 388821-393336 Boechera stricta
Bostr.3148s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold3148: 388821-389820 Boechera stricta
Bostr.3148s0052 2.0kb upstream 2.0kb upstream 5516 true Scaffold3148: 389821-395336 Boechera stricta
Bostr.3148s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold3148: 393337-395336 Boechera stricta
Bostr.3148s0052 2.0kb downstream 2.0kb downstream 5516 true Scaffold3148: 387821-393336 Boechera stricta
Bostr.3148s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold3148: 387821-389820 Boechera stricta
Bostr.3148s0052 5.0kb upstream 5.0kb upstream 8516 true Scaffold3148: 389821-398336 Boechera stricta
Bostr.3148s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold3148: 393337-398336 Boechera stricta
Bostr.3148s0052 5.0kb downstream 5.0kb downstream 8516 true Scaffold3148: 384821-393336 Boechera stricta
Bostr.3148s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold3148: 384821-389820 Boechera stricta
Bostr.3148s0052 10.0kb upstream 10.0kb upstream 13516 true Scaffold3148: 389821-403336 Boechera stricta
Bostr.3148s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold3148: 393337-403336 Boechera stricta
Bostr.3148s0052 10.0kb downstream 10.0kb downstream 13516 true Scaffold3148: 379821-393336 Boechera stricta
Bostr.3148s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold3148: 379821-389820 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370507 5261 Brassicaceae View MSA
123834332 5264 Brassicales-Malvales View MSA
124346208 5266 SBM View MSA
124237601 5268 Malvidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain