Gene : Bostr.30275s0480 B. stricta v1.2
Defline:  (1 of 1) PTHR32494:SF7 - ALLANTOATE DEIMINASE Genomic Order:  480
Name:  ? Bostr.30275s0480 Secondary Identifier:  ? PAC:30665011
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5692 Boechera stricta pathologic  
Bstricta PWY-5698 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0480 0.5kb upstream 0.5kb upstream 4202 true Scaffold30275: 2924605-2928806 Boechera stricta
Bostr.30275s0480 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 2924605-2925104 Boechera stricta
Bostr.30275s0480 0.5kb downstream 0.5kb downstream 4202 true Scaffold30275: 2925105-2929306 Boechera stricta
Bostr.30275s0480 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 2928807-2929306 Boechera stricta
Bostr.30275s0480 1.0kb upstream 1.0kb upstream 4702 true Scaffold30275: 2924105-2928806 Boechera stricta
Bostr.30275s0480 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 2924105-2925104 Boechera stricta
Bostr.30275s0480 1.0kb downstream 1.0kb downstream 4702 true Scaffold30275: 2925105-2929806 Boechera stricta
Bostr.30275s0480 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 2928807-2929806 Boechera stricta
Bostr.30275s0480 2.0kb upstream 2.0kb upstream 5702 true Scaffold30275: 2923105-2928806 Boechera stricta
Bostr.30275s0480 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 2923105-2925104 Boechera stricta
Bostr.30275s0480 2.0kb downstream 2.0kb downstream 5702 true Scaffold30275: 2925105-2930806 Boechera stricta
Bostr.30275s0480 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 2928807-2930806 Boechera stricta
Bostr.30275s0480 5.0kb upstream 5.0kb upstream 8702 true Scaffold30275: 2920105-2928806 Boechera stricta
Bostr.30275s0480 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 2920105-2925104 Boechera stricta
Bostr.30275s0480 5.0kb downstream 5.0kb downstream 8702 true Scaffold30275: 2925105-2933806 Boechera stricta
Bostr.30275s0480 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 2928807-2933806 Boechera stricta
Bostr.30275s0480 10.0kb upstream 10.0kb upstream 13702 true Scaffold30275: 2915105-2928806 Boechera stricta
Bostr.30275s0480 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 2915105-2925104 Boechera stricta
Bostr.30275s0480 10.0kb downstream 10.0kb downstream 13702 true Scaffold30275: 2925105-2938806 Boechera stricta
Bostr.30275s0480 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 2928807-2938806 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369287 5261 Brassicaceae View MSA
123827726 5264 Brassicales-Malvales View MSA
124342147 5266 SBM View MSA
124242730 5268 Malvidae View MSA
124067996 5270 Rosid View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain