Gene : Bostr.30275s0343 B. stricta v1.2
Defline:  (1 of 2) PTHR22952:SF210 - DOG1 ALPHA SPLICE VARIANT Genomic Order:  343
Name:  ? Bostr.30275s0343 Secondary Identifier:  ? PAC:30664982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.30275s0343 0.5kb upstream 0.5kb upstream 1825 true Scaffold30275: 2144717-2146541 Boechera stricta
Bostr.30275s0343 0.5kb upstream 0.5kb upstream 500 false Scaffold30275: 2144717-2145216 Boechera stricta
Bostr.30275s0343 0.5kb downstream 0.5kb downstream 1825 true Scaffold30275: 2145217-2147041 Boechera stricta
Bostr.30275s0343 0.5kb downstream 0.5kb downstream 500 false Scaffold30275: 2146542-2147041 Boechera stricta
Bostr.30275s0343 1.0kb upstream 1.0kb upstream 2325 true Scaffold30275: 2144217-2146541 Boechera stricta
Bostr.30275s0343 1.0kb upstream 1.0kb upstream 1000 false Scaffold30275: 2144217-2145216 Boechera stricta
Bostr.30275s0343 1.0kb downstream 1.0kb downstream 2325 true Scaffold30275: 2145217-2147541 Boechera stricta
Bostr.30275s0343 1.0kb downstream 1.0kb downstream 1000 false Scaffold30275: 2146542-2147541 Boechera stricta
Bostr.30275s0343 2.0kb upstream 2.0kb upstream 3325 true Scaffold30275: 2143217-2146541 Boechera stricta
Bostr.30275s0343 2.0kb upstream 2.0kb upstream 2000 false Scaffold30275: 2143217-2145216 Boechera stricta
Bostr.30275s0343 2.0kb downstream 2.0kb downstream 3325 true Scaffold30275: 2145217-2148541 Boechera stricta
Bostr.30275s0343 2.0kb downstream 2.0kb downstream 2000 false Scaffold30275: 2146542-2148541 Boechera stricta
Bostr.30275s0343 5.0kb upstream 5.0kb upstream 6325 true Scaffold30275: 2140217-2146541 Boechera stricta
Bostr.30275s0343 5.0kb upstream 5.0kb upstream 5000 false Scaffold30275: 2140217-2145216 Boechera stricta
Bostr.30275s0343 5.0kb downstream 5.0kb downstream 6325 true Scaffold30275: 2145217-2151541 Boechera stricta
Bostr.30275s0343 5.0kb downstream 5.0kb downstream 5000 false Scaffold30275: 2146542-2151541 Boechera stricta
Bostr.30275s0343 10.0kb upstream 10.0kb upstream 11325 true Scaffold30275: 2135217-2146541 Boechera stricta
Bostr.30275s0343 10.0kb upstream 10.0kb upstream 10000 false Scaffold30275: 2135217-2145216 Boechera stricta
Bostr.30275s0343 10.0kb downstream 10.0kb downstream 11325 true Scaffold30275: 2145217-2156541 Boechera stricta
Bostr.30275s0343 10.0kb downstream 10.0kb downstream 10000 false Scaffold30275: 2146542-2156541 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380472 5261 Brassicaceae View MSA
123802735 5264 Brassicales-Malvales View MSA
124299903 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain