Gene : Bostr.3148s0226 B. stricta v1.2
Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  226
Name:  ? Bostr.3148s0226 Secondary Identifier:  ? PAC:30655541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3148s0226 0.5kb upstream 0.5kb upstream 3713 true Scaffold3148: 1948392-1952104 Boechera stricta
Bostr.3148s0226 0.5kb upstream 0.5kb upstream 500 false Scaffold3148: 1948392-1948891 Boechera stricta
Bostr.3148s0226 0.5kb downstream 0.5kb downstream 3713 true Scaffold3148: 1948892-1952604 Boechera stricta
Bostr.3148s0226 0.5kb downstream 0.5kb downstream 500 false Scaffold3148: 1952105-1952604 Boechera stricta
Bostr.3148s0226 1.0kb upstream 1.0kb upstream 4213 true Scaffold3148: 1947892-1952104 Boechera stricta
Bostr.3148s0226 1.0kb upstream 1.0kb upstream 1000 false Scaffold3148: 1947892-1948891 Boechera stricta
Bostr.3148s0226 1.0kb downstream 1.0kb downstream 4213 true Scaffold3148: 1948892-1953104 Boechera stricta
Bostr.3148s0226 1.0kb downstream 1.0kb downstream 1000 false Scaffold3148: 1952105-1953104 Boechera stricta
Bostr.3148s0226 2.0kb upstream 2.0kb upstream 5213 true Scaffold3148: 1946892-1952104 Boechera stricta
Bostr.3148s0226 2.0kb upstream 2.0kb upstream 2000 false Scaffold3148: 1946892-1948891 Boechera stricta
Bostr.3148s0226 2.0kb downstream 2.0kb downstream 5213 true Scaffold3148: 1948892-1954104 Boechera stricta
Bostr.3148s0226 2.0kb downstream 2.0kb downstream 2000 false Scaffold3148: 1952105-1954104 Boechera stricta
Bostr.3148s0226 5.0kb upstream 5.0kb upstream 8213 true Scaffold3148: 1943892-1952104 Boechera stricta
Bostr.3148s0226 5.0kb upstream 5.0kb upstream 5000 false Scaffold3148: 1943892-1948891 Boechera stricta
Bostr.3148s0226 5.0kb downstream 5.0kb downstream 8213 true Scaffold3148: 1948892-1957104 Boechera stricta
Bostr.3148s0226 5.0kb downstream 5.0kb downstream 5000 false Scaffold3148: 1952105-1957104 Boechera stricta
Bostr.3148s0226 10.0kb upstream 10.0kb upstream 13213 true Scaffold3148: 1938892-1952104 Boechera stricta
Bostr.3148s0226 10.0kb upstream 10.0kb upstream 10000 false Scaffold3148: 1938892-1948891 Boechera stricta
Bostr.3148s0226 10.0kb downstream 10.0kb downstream 13213 true Scaffold3148: 1948892-1962104 Boechera stricta
Bostr.3148s0226 10.0kb downstream 10.0kb downstream 10000 false Scaffold3148: 1952105-1962104 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377393 5261 Brassicaceae View MSA
123836440 5264 Brassicales-Malvales View MSA
124343009 5266 SBM View MSA
124239372 5268 Malvidae View MSA
124064535 5270 Rosid View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain