Gene : Bostr.3148s0162 B. stricta v1.2
Defline:  (1 of 7) PTHR11880 - RIBOSOMAL PROTEIN S19P FAMILY MEMBER Genomic Order:  162
Name:  ? Bostr.3148s0162 Secondary Identifier:  ? PAC:30655584
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3148s0162 0.5kb upstream 0.5kb upstream 1754 true Scaffold3148: 1258994-1260747 Boechera stricta
Bostr.3148s0162 0.5kb upstream 0.5kb upstream 500 false Scaffold3148: 1258994-1259493 Boechera stricta
Bostr.3148s0162 0.5kb downstream 0.5kb downstream 1754 true Scaffold3148: 1259494-1261247 Boechera stricta
Bostr.3148s0162 0.5kb downstream 0.5kb downstream 500 false Scaffold3148: 1260748-1261247 Boechera stricta
Bostr.3148s0162 1.0kb upstream 1.0kb upstream 2254 true Scaffold3148: 1258494-1260747 Boechera stricta
Bostr.3148s0162 1.0kb upstream 1.0kb upstream 1000 false Scaffold3148: 1258494-1259493 Boechera stricta
Bostr.3148s0162 1.0kb downstream 1.0kb downstream 2254 true Scaffold3148: 1259494-1261747 Boechera stricta
Bostr.3148s0162 1.0kb downstream 1.0kb downstream 1000 false Scaffold3148: 1260748-1261747 Boechera stricta
Bostr.3148s0162 2.0kb upstream 2.0kb upstream 3254 true Scaffold3148: 1257494-1260747 Boechera stricta
Bostr.3148s0162 2.0kb upstream 2.0kb upstream 2000 false Scaffold3148: 1257494-1259493 Boechera stricta
Bostr.3148s0162 2.0kb downstream 2.0kb downstream 3254 true Scaffold3148: 1259494-1262747 Boechera stricta
Bostr.3148s0162 2.0kb downstream 2.0kb downstream 2000 false Scaffold3148: 1260748-1262747 Boechera stricta
Bostr.3148s0162 5.0kb upstream 5.0kb upstream 6254 true Scaffold3148: 1254494-1260747 Boechera stricta
Bostr.3148s0162 5.0kb upstream 5.0kb upstream 5000 false Scaffold3148: 1254494-1259493 Boechera stricta
Bostr.3148s0162 5.0kb downstream 5.0kb downstream 6254 true Scaffold3148: 1259494-1265747 Boechera stricta
Bostr.3148s0162 5.0kb downstream 5.0kb downstream 5000 false Scaffold3148: 1260748-1265747 Boechera stricta
Bostr.3148s0162 10.0kb upstream 10.0kb upstream 11254 true Scaffold3148: 1249494-1260747 Boechera stricta
Bostr.3148s0162 10.0kb upstream 10.0kb upstream 10000 false Scaffold3148: 1249494-1259493 Boechera stricta
Bostr.3148s0162 10.0kb downstream 10.0kb downstream 11254 true Scaffold3148: 1259494-1270747 Boechera stricta
Bostr.3148s0162 10.0kb downstream 10.0kb downstream 10000 false Scaffold3148: 1260748-1270747 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122339583 5261 Brassicaceae Singleton cluster - no MSA
123780071 5264 Brassicales-Malvales Singleton cluster - no MSA
124278382 5266 SBM Singleton cluster - no MSA
124133467 5268 Malvidae Singleton cluster - no MSA
123861654 5270 Rosid Singleton cluster - no MSA
123749976 5271 Pentapetalae View MSA
122796059 5272 Eudicot View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain