Gene : Bostr.3148s0165 B. stricta v1.2

Defline:  (1 of 2) PTHR22904//PTHR22904:SF381 - TPR REPEAT CONTAINING PROTEIN Genomic Order:  165
Name:  ? Bostr.3148s0165 Secondary Identifier:  ? PAC:30655362

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3148s0165 0.5kb upstream 0.5kb upstream 2249 true Scaffold3148: 1272562-1274810 Boechera stricta
Bostr.3148s0165 0.5kb upstream 0.5kb upstream 500 false Scaffold3148: 1274311-1274810 Boechera stricta
Bostr.3148s0165 0.5kb downstream 0.5kb downstream 2249 true Scaffold3148: 1272062-1274310 Boechera stricta
Bostr.3148s0165 0.5kb downstream 0.5kb downstream 500 false Scaffold3148: 1272062-1272561 Boechera stricta
Bostr.3148s0165 1.0kb upstream 1.0kb upstream 2749 true Scaffold3148: 1272562-1275310 Boechera stricta
Bostr.3148s0165 1.0kb upstream 1.0kb upstream 1000 false Scaffold3148: 1274311-1275310 Boechera stricta
Bostr.3148s0165 1.0kb downstream 1.0kb downstream 2749 true Scaffold3148: 1271562-1274310 Boechera stricta
Bostr.3148s0165 1.0kb downstream 1.0kb downstream 1000 false Scaffold3148: 1271562-1272561 Boechera stricta
Bostr.3148s0165 2.0kb upstream 2.0kb upstream 3749 true Scaffold3148: 1272562-1276310 Boechera stricta
Bostr.3148s0165 2.0kb upstream 2.0kb upstream 2000 false Scaffold3148: 1274311-1276310 Boechera stricta
Bostr.3148s0165 2.0kb downstream 2.0kb downstream 3749 true Scaffold3148: 1270562-1274310 Boechera stricta
Bostr.3148s0165 2.0kb downstream 2.0kb downstream 2000 false Scaffold3148: 1270562-1272561 Boechera stricta
Bostr.3148s0165 5.0kb upstream 5.0kb upstream 6749 true Scaffold3148: 1272562-1279310 Boechera stricta
Bostr.3148s0165 5.0kb upstream 5.0kb upstream 5000 false Scaffold3148: 1274311-1279310 Boechera stricta
Bostr.3148s0165 5.0kb downstream 5.0kb downstream 6749 true Scaffold3148: 1267562-1274310 Boechera stricta
Bostr.3148s0165 5.0kb downstream 5.0kb downstream 5000 false Scaffold3148: 1267562-1272561 Boechera stricta
Bostr.3148s0165 10.0kb upstream 10.0kb upstream 11749 true Scaffold3148: 1272562-1284310 Boechera stricta
Bostr.3148s0165 10.0kb upstream 10.0kb upstream 10000 false Scaffold3148: 1274311-1284310 Boechera stricta
Bostr.3148s0165 10.0kb downstream 10.0kb downstream 11749 true Scaffold3148: 1262562-1274310 Boechera stricta
Bostr.3148s0165 10.0kb downstream 10.0kb downstream 10000 false Scaffold3148: 1262562-1272561 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
122361460 5261 Brassicaceae View MSA
123828391 5264 Brassicales-Malvales View MSA
124346418 5266 SBM View MSA
124247787 5268 Malvidae View MSA
124070249 5270 Rosid View MSA
123737389 5271 Pentapetalae View MSA
122790408 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain