Gene : Bostr.3359s0087 B. stricta v1.2
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  87
Name:  ? Bostr.3359s0087 Secondary Identifier:  ? PAC:30655262
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0087 0.5kb upstream 0.5kb upstream 1680 true Scaffold3359: 918681-920360 Boechera stricta
Bostr.3359s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 919861-920360 Boechera stricta
Bostr.3359s0087 0.5kb downstream 0.5kb downstream 1680 true Scaffold3359: 918181-919860 Boechera stricta
Bostr.3359s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 918181-918680 Boechera stricta
Bostr.3359s0087 1.0kb upstream 1.0kb upstream 2180 true Scaffold3359: 918681-920860 Boechera stricta
Bostr.3359s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 919861-920860 Boechera stricta
Bostr.3359s0087 1.0kb downstream 1.0kb downstream 2180 true Scaffold3359: 917681-919860 Boechera stricta
Bostr.3359s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 917681-918680 Boechera stricta
Bostr.3359s0087 2.0kb upstream 2.0kb upstream 3180 true Scaffold3359: 918681-921860 Boechera stricta
Bostr.3359s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 919861-921860 Boechera stricta
Bostr.3359s0087 2.0kb downstream 2.0kb downstream 3180 true Scaffold3359: 916681-919860 Boechera stricta
Bostr.3359s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 916681-918680 Boechera stricta
Bostr.3359s0087 5.0kb upstream 5.0kb upstream 6180 true Scaffold3359: 918681-924860 Boechera stricta
Bostr.3359s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 919861-924860 Boechera stricta
Bostr.3359s0087 5.0kb downstream 5.0kb downstream 6180 true Scaffold3359: 913681-919860 Boechera stricta
Bostr.3359s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 913681-918680 Boechera stricta
Bostr.3359s0087 10.0kb upstream 10.0kb upstream 11180 true Scaffold3359: 918681-929860 Boechera stricta
Bostr.3359s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 919861-929860 Boechera stricta
Bostr.3359s0087 10.0kb downstream 10.0kb downstream 11180 true Scaffold3359: 908681-919860 Boechera stricta
Bostr.3359s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 908681-918680 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379506 5261 Brassicaceae View MSA
123835927 5264 Brassicales-Malvales View MSA
124322107 5266 SBM View MSA
124251643 5268 Malvidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain