Gene : Bostr.3359s0001 B. stricta v1.2
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1
Name:  ? Bostr.3359s0001 Secondary Identifier:  ? PAC:30655265
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPAS-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0001 0.5kb upstream 0.5kb upstream 3174 true Scaffold3359: 16045-19218 Boechera stricta
Bostr.3359s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 18719-19218 Boechera stricta
Bostr.3359s0001 0.5kb downstream 0.5kb downstream 3174 true Scaffold3359: 15545-18718 Boechera stricta
Bostr.3359s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 15545-16044 Boechera stricta
Bostr.3359s0001 1.0kb upstream 1.0kb upstream 3674 true Scaffold3359: 16045-19718 Boechera stricta
Bostr.3359s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 18719-19718 Boechera stricta
Bostr.3359s0001 1.0kb downstream 1.0kb downstream 3674 true Scaffold3359: 15045-18718 Boechera stricta
Bostr.3359s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 15045-16044 Boechera stricta
Bostr.3359s0001 2.0kb upstream 2.0kb upstream 4674 true Scaffold3359: 16045-20718 Boechera stricta
Bostr.3359s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 18719-20718 Boechera stricta
Bostr.3359s0001 2.0kb downstream 2.0kb downstream 4674 true Scaffold3359: 14045-18718 Boechera stricta
Bostr.3359s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 14045-16044 Boechera stricta
Bostr.3359s0001 5.0kb upstream 5.0kb upstream 7674 true Scaffold3359: 16045-23718 Boechera stricta
Bostr.3359s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 18719-23718 Boechera stricta
Bostr.3359s0001 5.0kb downstream 5.0kb downstream 7674 true Scaffold3359: 11045-18718 Boechera stricta
Bostr.3359s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 11045-16044 Boechera stricta
Bostr.3359s0001 10.0kb upstream 10.0kb upstream 12674 true Scaffold3359: 16045-28718 Boechera stricta
Bostr.3359s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 18719-28718 Boechera stricta
Bostr.3359s0001 10.0kb downstream 10.0kb downstream 12674 true Scaffold3359: 6045-18718 Boechera stricta
Bostr.3359s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 6045-16044 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374702 5261 Brassicaceae View MSA
123830494 5264 Brassicales-Malvales View MSA
124342316 5266 SBM View MSA
124238632 5268 Malvidae View MSA
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain